Transcript Information: S_Transcript_82122.p3


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.31669075919878
Replicate 30.70594205104691
Condition 2: 8 Hour
Replicate 10.51017680184529
Replicate 20.53521168994561
Replicate 30
Condition 3: 24 Hour
Replicate 10.62712584183524
Replicate 20.86751431871186
Replicate 31.9308742128318


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82122.p3 GENE.S_Transcript_82122~~S_Transcript_82122.p3 ORF type:complete len:209 (+),score=25.34,zf-RVT|PF13966.2|1.2e-18 S_Transcript_82122:2752-3378(+)
ATGCTAAATGTAAGAGACGAAATTTGCAGCCTGATTGGAGAGAGCAGAGTAAAAGAGACGCTGCAAGACTGGGTAATGTCTGGGAAACTAACAACAAAGGCCTATCACTTGTTCAAAGGGGAAGGGACAAAGAAGATATGGGCAAAAACGTTTTGGGATGGAGCTGTAATGCCAAAACACTCAATTATTGCTGTGATGGCAATCCATAATGGACTCCCAACACAAGATAATCTCACTAGAAGAGGTTTGCAGCTAGCCAACAGGTGTGTTCTCTGCTGCTGTGCACAAGAGTCTGTTCCACATATCTTCTTTGAATGCTGTTTAACTAAGACAGTATGGAGAAATGTCCTGAACTGGCTGCAGATAAAGAGAAGACAGTTTAGCCTTAAAGGGGAGCTTAAATGGTTCTCCAAATATATTACAGGAAAGGCTTGGATAAAGAAGCTAAAGAGATGTACATTCATGACTGCCATTTATGAGATTTGGGAGGAAAGAAATGGGAGAATTTTCCAATCTAGGGAGCACACCAGTGAGCAAATAGTGAACAAAGTAAAATACTATGTATCTACTAGAATGCTACATGTAGATGGGATGCCATATGAGAGGATGATAGATTACTTGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82122.p3 GENE.S_Transcript_82122~~S_Transcript_82122.p3 ORF type:complete len:209 (+),score=25.34,zf-RVT|PF13966.2|1.2e-18 S_Transcript_82122:2752-3378(+)
MLNVRDEICSLIGESRVKETLQDWVMSGKLTTKAYHLFKGEGTKKIWAKTFWDGAVMPKHSIIAVMAIHNGLPTQDNLTRRGLQLANRCVLCCCAQESVPHIFFECCLTKTVWRNVLNWLQIKRRQFSLKGELKWFSKYITGKAWIKKLKRCTFMTAIYEIWEERNGRIFQSREHTSEQIVNKVKYYVSTRMLHVDGMPYERMIDYLL*

Click here to download the sequence:
Link to NCBI Protein BLAST