Transcript Information: S_Transcript_82139.p1


Annotated TAIR IDAT3G12500.1
Annotated Gene Namebasic chitinase
Annotated Gene Symbol(s)ATHCHIB, PR3, PR-3, CHI-B, B-CHI, HCHIB
Annotation TypeHomolog
Chromosome Positionchr3:3962501-3963984 | Reverse length=335
E-Value7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2010752901277
Replicate 20.16588563577079
Replicate 30
Condition 2: 8 Hour
Replicate 10.96204768347968
Replicate 20.33641877653724
Replicate 31.4424257777807
Condition 3: 24 Hour
Replicate 10
Replicate 20.3408091966368
Replicate 30.94819715808707


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82139.p1 GENE.S_Transcript_82139~~S_Transcript_82139.p1 ORF type:3prime_partial len:133 (+),score=13.69,Chitin_bind_1|PF00187.15|2.1e-14,Chitin_bind_1|PF00187.15|1.2e-11 S_Transcript_82139:41-436(+)
ATGTTAGCAGCAACACTATACATGTCCACGGTCGTGCTGCACCTAGCAGCACTCCCAGTCTTAGGAGAAGGAGACCGTGTAGAACAACCCCAGCTGCTAATGCCATTATGGCAGAAGCTGAGAGGTCTAGAATGTGGGAAGCAAGCTGGGGGAAAAGTTTGCCCAGATGGTCGCTGCTGTAGCAAGTGGGGGTATTGTGGGGACACCGACGCCCACTGTGGGAGTGGTTGTCAGAGTCAGTGTGACTTTGCAAAGCGATGTGGCAAGGACTTTAGAGGTCGGCTTTGTCCCAACGGCGAGTGTTGTAGCCAGTATGGGTATTTTGGTGGAACAAAAGCCCATTGTGACAAGGGGTGTCAGAGCCAGTGTGGCTATGCAAAGCGATGTGGCAAGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82139.p1 GENE.S_Transcript_82139~~S_Transcript_82139.p1 ORF type:3prime_partial len:133 (+),score=13.69,Chitin_bind_1|PF00187.15|2.1e-14,Chitin_bind_1|PF00187.15|1.2e-11 S_Transcript_82139:41-436(+)
MLAATLYMSTVVLHLAALPVLGEGDRVEQPQLLMPLWQKLRGLECGKQAGGKVCPDGRCCSKWGYCGDTDAHCGSGCQSQCDFAKRCGKDFRGRLCPNGECCSQYGYFGGTKAHCDKGCQSQCGYAKRCGKD

Click here to download the sequence:
Link to NCBI Protein BLAST