Transcript Information: S_Transcript_82147.p2


Annotated TAIR IDAT5G04770.1
Annotated Gene Namecationic amino acid transporter 6
Annotated Gene Symbol(s)ATCAT6, CAT6
Annotation TypeHomolog
Chromosome Positionchr5:1379118-1382304 | Forward length=583
E-Value7E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6293674225621
Replicate 21.3507830341336
Replicate 30.50184315873743
Condition 2: 8 Hour
Replicate 11.3056361418653
Replicate 21.3697050187588
Replicate 31.5950634262231
Condition 3: 24 Hour
Replicate 10.74302324797939
Replicate 21.0792291226832
Replicate 31.0294712002088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82147.p2 GENE.S_Transcript_82147~~S_Transcript_82147.p2 ORF type:complete len:147 (+),score=6.80,AA_permease_2|PF13520.2|2.5e-08,AA_permease|PF00324.17|5.6e-06 S_Transcript_82147:1481-1921(+)
ATGGAAAACACACAAAAGTGTTCTAACAACAACATTTCATTCACTAAATGCCTTCATTCTCTATCACAAACGCCTTACAAGCTTAAAAAGAGAATGTTAGCTACATGGACTCCTGACCAAGAGCTGAACCGAGTGAGGCTAAGGTCAGGTGCAGACATGAAACGGAAGCTAAACTGGTTCGATTTAATCGCCCTCGGTGTAGGGGGAATTCTTGGGGTGGGTGTCTTTGTGACAACAGGTCCAGTGGCTCGGACTATAGCCGGTCCCGCTGTCTTTATCTCATATATGATTGCTGGCGTATCAGCTCTCCTTTCCTCCATGTGTTACACGGAATTCTCCATCGCTATCCCTGTGGCTGGAGGTGCTTTTAGTTATCTCAGACTCACTTTTGGTATGAAACTGAAAACTCAACTTTTTGCTGATTATCGCTCCTACTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82147.p2 GENE.S_Transcript_82147~~S_Transcript_82147.p2 ORF type:complete len:147 (+),score=6.80,AA_permease_2|PF13520.2|2.5e-08,AA_permease|PF00324.17|5.6e-06 S_Transcript_82147:1481-1921(+)
MENTQKCSNNNISFTKCLHSLSQTPYKLKKRMLATWTPDQELNRVRLRSGADMKRKLNWFDLIALGVGGILGVGVFVTTGPVARTIAGPAVFISYMIAGVSALLSSMCYTEFSIAIPVAGGAFSYLRLTFGMKLKTQLFADYRSYY*

Click here to download the sequence:
Link to NCBI Protein BLAST