Transcript Information: S_Transcript_82167.p1


Annotated TAIR IDAT1G15240.2
Annotated Gene NamePhox-associated domain;Phox-like;Sorting nexin, C-terminal
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5243799-5248604 | Forward length=1020
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8630157128864
Replicate 29.5916537860303
Replicate 310.391676677168
Condition 2: 8 Hour
Replicate 111.728004935885
Replicate 212.484740014969
Replicate 313.35358229799
Condition 3: 24 Hour
Replicate 111.758092103848
Replicate 210.526126708727
Replicate 39.8754179263956


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82167.p1 GENE.S_Transcript_82167~~S_Transcript_82167.p1 ORF type:complete len:1111 (+),score=268.69,PXA|PF02194.11|2.8e-40,PXA|PF02194.11|2.6e+03,Nexin_C|PF08628.8|1.6e-28,PX|PF00787.20|1.5e-15 S_Transcript_82167:480-3812(+)
ATGAGCACTCAGAGGCAATTGGTCACAACTCGTGACCTTTTAGAGGAAGCGAAGAAGCGAATTGTCATTCTCTCCATATGTGTCGTTGGTCTCTCTTATCTCATGTCCTTGACAAGCACATCAGTGTGGGTGAATCTGCCAGCTGCAGCCTTCTTGGTCATTCTTGTCCGCTACTTTTCAATGGATTTTGAGATGCGAAGAAAAGCGGCAGCTTATGACAGTAGAGCAACCACTGAAAACACTGCTATTCAAGAGAAACGTCTGGAAACTCCAAAACCAGCTGTCGAGAAAGACCAGTGGAGAAGCAAAGTCAATTCCCGTCTTGTTGAAGATGCCATTGATCAGTTTACAAGACATATAGTCTCCGAGTGGGTGACTGATCTCTGGTATTCTAAATTAACACCTGATCAAGAGGGCCCAGAGGAACTGGTGCAATTAATTGATGGTGTTTTGGGAGAAATTTCGTATCGCTTGAGACATATCAATCTCATCGATCTTCTGGCTAGAGATGTCATCCATCTTGTATGCAAGCATCTGGAGCTATTTCGTGCTTGTCAAGTGAAGATTGAGAAGAAGAACTTGGGAGGGCTTTCTTTTGATCAACGTGATATGCAGTTGAAAATTACTCTGGCTGCTGAAAACAAATTGCATCCACTTTTATTCTCTGCTGAATCAGAGCACAAGGTATTGCAGCACATTACGGATGGTCTAATTTCTGTTACTTTCAAGCCTGAAGATCTGCAATGTTCTTTCTTTCATTATGTTGTTCGAGAACTTCTTGCATGTGCAGTGTTGAGACCAGTCTTGAACATGGCTAACCCGAGATTTATTAATGAAAGAATTGAACAAGTAGCCATGTCTGTGAGGAAAGCAAATAAAGGAGCTCCAACTGCAGATGATACACCCTCATCCACAGAAAATGGATCCACTAACGTATCATCTGATAACTTTTCTCCGTTCCCGGATCCTTCTACCACAGGCGTTGAACTTGTTGAGCTTAAAACCACAGAATCTAAAAGTTCGATGGGCAAAAATGACAGAGAGAAGGTGAATGGTACAGACACAGCTAAAGATCCTTTGCTTGCAATTGACGCCCGGTCAAGTCGTTCTTGGAGTTCGTTGCCCTTAAGCTCCCAGGAAGCTGGCAGAAGTCACATTGAAAGATCCACCTCTGGAGGAGAGTGGGGTGATATGCTGGATTATTTTTCTCGTAGAAAGACACAAGCTCTTGCTCCAGAACACTTTGACAATATGTGGTCAAAAGGCAGAAACTACAGTAAGGACACTCGAGCAGGGGATCCTGGTGGTCAAAGTTCTTCGGCGAAGAGACCGAATGCAGTCAATTCATTGAACATCTTGCCAAAACATAAAGTAAGTGGAGACAGGGCCACAACTGCAGAGAAAGGTGCAGCTCTTTCTGGTTGCAATGTAAGGTCTCAGTCTGAAACAATGTACATACATTCTGACAGAAACACATCAACTCCACCTCCCCTTACATCAGATGAAGACGAGGAGGAGCCGAAGCTCACAACTTCTGATGAGACAGAACCAGTGAGCAGTAGTCACAATTCCTCAGAAGATGAAGACAGTAGGATAACAGGTCTAGATTCTCCAACAACCAAAGTCTGGGATGGTAGACATAATAGAAATTCTGGAGTTTCTCATATTCGCCATCCACTGGAGAGCATAGATGGTAAAACAACCAGGAGAACGAATAAAGGGCAGTACCAAAGGTTGCAAAGGCAACAAAGTGGCCGGAAAAGGTCTAGGTTGGGTAGTCAGAAGTTGCCCATGTGGCAAGAGGTTGAGAGGACAAGCTTCTTGTCAGCAGAGGGACAAGACATTCATCCTTTGAAACAGCAGGTGAAAGATGATGACTCGAGTGATGAATATGATATGGCGATTATGGGTAGACTTCAGAGTGGAACTACTGCTTCTTCATCGGCTTCTTCCTTACCTGGAAGCTTTAGTTCATCTGTTAATTCTCCCCAAACTGCGTTCTTAGGAGATACATATTTCAAGTTGAGATGTGAGGTTTTAGGTGCAAACATTGTCAGAAGCAGCTCCAAAACATTTGCCGTGTATTCCATATCTGTCATAGATGCTGAAAATAACAGTTGGTCAATCAAAAGAAGATACCGACATTTTGAGGAGCTACATCGACGATTGAAGGAATATCAAGAGTATAGTCTTCACTTACCACCTAAACATTTCCTATCAACAGGTCTTGATGTGCCTGTGATTCGAGAACGATGTAGATTACTTGATGAATATTTGAAGAAGCTCATGCAACTTCCATCTATTTCGGGATCAATTGATGTGTGGGACTTTTTAAGCATTGATTCTCAGACATATACATTTTCAAGTGCCTTTTCTATTGTGGAAACATTGTCAGTTGACCCAATTCACAAGTCACATGATAAGGCTCTGCGCACTTCTGATTTTGAAAGCCCTCCAATAGATCACTCAAAATCCAGTAGAGATTGTGTAGAATCTGCAAATGGAGCTGCTACATCTCTGATGAATCATAGCTCTGCAGATGGCCTGAAATGTGGTGTGAAAGGCAAAACAAATTCACCTGGGAAAGTGCCTGTCCAAAATGTTGGAAAAAAGGGAAAGGGGATAGAAGGCGATATGCAGCAAAAATCTGAACTTTTTCTAGATACCGCTGATGATCCAACTTTTCCTCCAGAGTGGGTGCCACCAAATTTGAGTGGCCCTATATTAGACTTGGTGGATGTCATTTTTCAGCTTCAGGAAGGAGCATGGATCAGGCGAAAGGCTTTTTGGGTAGCCAAACAGGTGTTGCAGTTGGGAATGGGTGATGCACTTGATGATTGGTTGCTTGAGAAGATCCAGCGTTTGCGTAGGGGATCTGTTGTTGCTTCAGTCATAAAGCGGGTTGAGCAGATACTTTGGCCTGATGGAATATTCATCACGAAGCATCCAAGAAGGCAGAGGCAGCCTGGCTCTGGTACTCCATCTCAGAGTCCGTCTCACAAAAAGCTTCCTGATGAAATGTCGTCTCCTAAGGAACAGGATGTTCAGAAGCTGTTTGAGCAGCAAGAAAGAGAGGCTGAGGAACGGGCGAAGTTTGTCTACGAGCTAATGATTGATAATGCTCCAGCTGCTGTTGTAAGTCTTGTTGGTCGGAAGGAGTATGAACAATGTGCCAAGGATCTTTACTTCTTCATTCAGTCATCTGTATGTCTGAAACAGCTGGTTGTGGATCTTCTGCAACTCTTCCTTTTGTATGCATTCCCAGAGCTCGATCATACCTTCAAGCAACTACGTGATGAAAAACAGAAGTTTGGGGAATTTAAACCTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82167.p1 GENE.S_Transcript_82167~~S_Transcript_82167.p1 ORF type:complete len:1111 (+),score=268.69,PXA|PF02194.11|2.8e-40,PXA|PF02194.11|2.6e+03,Nexin_C|PF08628.8|1.6e-28,PX|PF00787.20|1.5e-15 S_Transcript_82167:480-3812(+)
MSTQRQLVTTRDLLEEAKKRIVILSICVVGLSYLMSLTSTSVWVNLPAAAFLVILVRYFSMDFEMRRKAAAYDSRATTENTAIQEKRLETPKPAVEKDQWRSKVNSRLVEDAIDQFTRHIVSEWVTDLWYSKLTPDQEGPEELVQLIDGVLGEISYRLRHINLIDLLARDVIHLVCKHLELFRACQVKIEKKNLGGLSFDQRDMQLKITLAAENKLHPLLFSAESEHKVLQHITDGLISVTFKPEDLQCSFFHYVVRELLACAVLRPVLNMANPRFINERIEQVAMSVRKANKGAPTADDTPSSTENGSTNVSSDNFSPFPDPSTTGVELVELKTTESKSSMGKNDREKVNGTDTAKDPLLAIDARSSRSWSSLPLSSQEAGRSHIERSTSGGEWGDMLDYFSRRKTQALAPEHFDNMWSKGRNYSKDTRAGDPGGQSSSAKRPNAVNSLNILPKHKVSGDRATTAEKGAALSGCNVRSQSETMYIHSDRNTSTPPPLTSDEDEEEPKLTTSDETEPVSSSHNSSEDEDSRITGLDSPTTKVWDGRHNRNSGVSHIRHPLESIDGKTTRRTNKGQYQRLQRQQSGRKRSRLGSQKLPMWQEVERTSFLSAEGQDIHPLKQQVKDDDSSDEYDMAIMGRLQSGTTASSSASSLPGSFSSSVNSPQTAFLGDTYFKLRCEVLGANIVRSSSKTFAVYSISVIDAENNSWSIKRRYRHFEELHRRLKEYQEYSLHLPPKHFLSTGLDVPVIRERCRLLDEYLKKLMQLPSISGSIDVWDFLSIDSQTYTFSSAFSIVETLSVDPIHKSHDKALRTSDFESPPIDHSKSSRDCVESANGAATSLMNHSSADGLKCGVKGKTNSPGKVPVQNVGKKGKGIEGDMQQKSELFLDTADDPTFPPEWVPPNLSGPILDLVDVIFQLQEGAWIRRKAFWVAKQVLQLGMGDALDDWLLEKIQRLRRGSVVASVIKRVEQILWPDGIFITKHPRRQRQPGSGTPSQSPSHKKLPDEMSSPKEQDVQKLFEQQEREAEERAKFVYELMIDNAPAAVVSLVGRKEYEQCAKDLYFFIQSSVCLKQLVVDLLQLFLLYAFPELDHTFKQLRDEKQKFGEFKPT*

Click here to download the sequence:
Link to NCBI Protein BLAST