Transcript Information: S_Transcript_82201.p1


Annotated TAIR IDAT3G55480.2
Annotated Gene Nameprotein affected trafficking 2
Annotated Gene Symbol(s)PAT2
Annotation TypeOrtholog
Chromosome Positionchr3:20566372-20571171 | Reverse length=1115
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5876413738746
Replicate 25.3750155738185
Replicate 34.8661572779949
Condition 2: 8 Hour
Replicate 16.9396608771673
Replicate 28.5394743268614
Replicate 37.0490401930281
Condition 3: 24 Hour
Replicate 15.533268641417
Replicate 25.1227788699396
Replicate 34.9024378307218


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82201.p1 GENE.S_Transcript_82201~~S_Transcript_82201.p1 ORF type:complete len:1137 (+),score=222.61,Adaptin_N|PF01602.16|5.5e-107,HEAT|PF02985.18|3.3,HEAT|PF02985.18|3.7,HEAT|PF02985.18|4,HEAT|PF02985.18|3.3e+02,HEAT_2|PF13646.2|1.7e-05,HEAT_2|PF13646.2|4.2e+02,HEAT_2|PF13646.2|82,AP3B1_C|PF14796.2|1.5e-06 S_Transcript_82201:196-3606(+)
ATGTTCCCCCAATTCGGAGCAACAGCTGAGACGCTGAGCAAAGCATCAACAATGGTGTTTCGCATCGGTACGGACGCTCACCTTTACGACGATCCTGAAGATGTCAACATCGCTCCCCTTCTCGACAGCAAATTCGATAACGAGAAATGCGAAGCTCTCAAACGCCTCCTTGCTCTCATCGCTCAAGGCTTTGATGTCTCCAATTTCTTCCCTCAGGTTGTGAAAAATGTCGCATCGCAATCACTGGAAGTCAAGAAGCTGGTATATCTGTACCTGTTGCATTACGCCGAAAAGCGTCCGAACGAAGCATTACTATCAATTAATTATTTCCAGAAGGACTTGGGGGACACCAATCCTTTGGTTCGGGCATGGGCTCTCCGTACCATGGCGGGTATCCGTTTACATGTAGTTGCACCTCTTGTTTTAGTTGCTGTGAACAAATGTGCTAGAGATCCATCCGTATATGTTAGAAAATGTGCAGCCAATGCTCTTCCTAAACTGAATGACTTGCGCCAGGAGGAAAATGCTTCTGCAATTGAAGAGATTATTGGAGTACTACTAAATGACAATTCACCTGGAGTAGTGGGAGCTGCTGCTGCTGCTTTTAATTCAATATGCCCAAATAACTTGCCTTTAATTGCAAGAAACTATAGAAGACTCTGTGAAACTCTACCCGATGTTGAGGAATGGGGTCAAATCATTTTGATTGGTATTCTATTGCGCTATGTGATAGCAAGGCATGGTCTTGTAAAAGAATCTGTGATGTTTTCTTCTCATGTTGCTGGAACTAACAGCTGTCAGAAGGTTGATTCTACTGTGGACATTGGCTTATCAGGGGGCAGTGACTTGGCTATTAGGAACTATAAGTATGAGATAGCAAATCTGGTAGCCAGGTCATACACTGAAGGTCCTGATGAATATCTATCACGGTCAAATTTCAGTGATGAGACTTTGTTTGGCTTAGATGATGCATGTCTTACTGATGCCATGACCAATGATGATGTGAAGATCCTTCTGAAATGTACGTCACCCCTACTATGGAGTCACAACAGTGCTGTGGTGCTTGCTGCTGCTGGAGTGCACTGGATAATGGCACCGAGGGATGATGTAAACAGAATTGTGAAGCCACTGTTGTTTGTCTTGAGATCATCAAGTGCATCAAAATTTGTGGTTCTCTGTAACATTCAAGTGTTTGTGAAAGTCATGCCTTCTCTGTTTGCTGACTATTATGAAGATTTCGTTATATCTACTTCAGAGCCTTACCAAATAAAAGCACTGAAGCTGGAAATTCTCTCTTCAATAGCTACAGATTCATCAATTCCTTACATTTTTCAGGAATTTCAGGATTACATTAGAGATCCCGACAGAAGATTTGCTGCTGATACTGTTGCTGCTATTGGTTTATGTGCACAACGACTCCCTAAACTAGCAAACTTATGCTTGGAAGGCCTGTTATCACTTACTAGACAGGGATCTTTAACTGGTGTGCCAAATGCTGTTGATGGCGAAGCTGGAATTTTGATCCAATCAGTGATGTCAATTAAGGCTATCATAAATCAGGATCCACCAAATCATGAGAAGGTTATAATTCAACTGGTTCGAAATTTGGATGCAATCAAGGTTCCTGCAGCACGAGCAATAATTATATGGATGGTTGGAGAGTACAATTCTGCAGGGGACAGAATTCCCTTAATGTTAACCTCTGTACTGAAGTATTTGGCTCATTGCTTTACGTCAGAAGAATCTGAAACAAAGCTCCAGATACTCAATACCGCTGCCAAGGTCTTGTTATGTGCCAAAGGAGCGGATCGAACAACTATTGAAAAAGTTGTGAACTTTGTGCTTGAGCTAGCAAAATGTGATGCAGATTATGATGTCCGTGACCGAGCCCGTGCTTTAGCAAAGATATTGTCTACCCTTTTGTTTTCTCAAAATCATAATGTCAATGATAATTCATTCAGGACGGAGGCAGCACATGTTGTTGCAGAAAAAATATTTGGGCCCCCGAAAGGCTCACTTTATCCTGAACCTGTAAATCACCGTTTTTATCTGCCTGGATCTCTTTCACAAATAGTTCTTCATGCCGCTCCAGGCTATGAACCTCTTCCAAAACCCTGTAGTTTGCATTACTCAGATATAGTTCAAGGAACAGGACTGTCTAAGGAATCTGATATAACAGACAATTCAGAGACACTGTCTGGTTCTCTGGATGTGGAAAGTGCATCAGGTTATAGTTCTCAACATTCAGATAGTGGCTCAAGTTTTAGTGATGGCAGTAAGGATAGTGGATATGCAACTGAAGCCGATGATAATGCTGATCCGTTGATCGAGATTTCTGATTCTAGGACCCCCTACAAGGGGCAAAATGGTGATGGTGGTGAGAGTAACTATTCACAATCTGAATCCAGTGGAGTGGAGAGCATATTGTCCAAAAGAGCTTTAGAGTCATGGTTGGGTGAGCAGCCTGTTTCTTTAGACCTGAAGCCATCAGAACATGATCAAGCACAGAGATCTGCCCGAATCTTCATCAGTGATATTAGTAGTCGAGTCAAGCCTAAATCATACACCCTTCTGGATGCTGCAAGTGGACAGGGCTTAAAGATTGATTATTCATTTTCTTCTCAGATGTCAGATATTTCACCATTACTTGTCTGTGTTGAGGTTTTCTTCAAGAATTGCTCTAATGCATCTTTATCAAAAGTGATTTTGGTAGATGATGGATCGAACCGGGGTCCAGATTCTACAGAACAATCCTCGGTGACCACGGAGAGGTCATCTCATTCTCATGATACTGTGCCAACTCTGGTTCCAATGGAAGAGATTGATTCTGTTGAACCAGACCAGATTATAAAAAGAATTCTCCATGTTCGATTTCACCATCATCTTCTGCCGTTGAAGTTATCCGTATGGTGTAGTGGCAAAAAGCATGTTGTGAAATTGCGGCCTGACATAGGTTATTTCATAAAGCCCTTAGAAATGGACATTGGAGCTTTTAGAAGTAAGGAATCCCAGCTCCCAGGGATGTTTGAATATGTGAGGAGATGTACCTTTGCTGATCACATTGTGGAGCTGAACAAAGACAAGAGTGTCAACTCCCTGCCAAAAGACGCTTACCTTGTAGTCTGTGAGAGCCTTGCATTAAAGATGCTAAGTAATGCAAACCTTTTTCTTGTATCTGTGGATTTGCCACTTGCATCAAAGCTTGACGACGCATCAGGTTTGTGCTTACGGTTTAGTGGCGAAATTCTGAGCAATTCCGTTCCTTGCTTGATTACCATTACTGTTGAAGGAAATTGCTTGGAACCACTCAACGTGTCTGTGAAAGTCAACTGTGAGGAAACTGTTTTTGGTTTAAACCTGTTAAATAGGGTTGTAAATTTCATAGCTGAATCCTCTACAAGCTCCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82201.p1 GENE.S_Transcript_82201~~S_Transcript_82201.p1 ORF type:complete len:1137 (+),score=222.61,Adaptin_N|PF01602.16|5.5e-107,HEAT|PF02985.18|3.3,HEAT|PF02985.18|3.7,HEAT|PF02985.18|4,HEAT|PF02985.18|3.3e+02,HEAT_2|PF13646.2|1.7e-05,HEAT_2|PF13646.2|4.2e+02,HEAT_2|PF13646.2|82,AP3B1_C|PF14796.2|1.5e-06 S_Transcript_82201:196-3606(+)
MFPQFGATAETLSKASTMVFRIGTDAHLYDDPEDVNIAPLLDSKFDNEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDTNPLVRAWALRTMAGIRLHVVAPLVLVAVNKCARDPSVYVRKCAANALPKLNDLRQEENASAIEEIIGVLLNDNSPGVVGAAAAAFNSICPNNLPLIARNYRRLCETLPDVEEWGQIILIGILLRYVIARHGLVKESVMFSSHVAGTNSCQKVDSTVDIGLSGGSDLAIRNYKYEIANLVARSYTEGPDEYLSRSNFSDETLFGLDDACLTDAMTNDDVKILLKCTSPLLWSHNSAVVLAAAGVHWIMAPRDDVNRIVKPLLFVLRSSSASKFVVLCNIQVFVKVMPSLFADYYEDFVISTSEPYQIKALKLEILSSIATDSSIPYIFQEFQDYIRDPDRRFAADTVAAIGLCAQRLPKLANLCLEGLLSLTRQGSLTGVPNAVDGEAGILIQSVMSIKAIINQDPPNHEKVIIQLVRNLDAIKVPAARAIIIWMVGEYNSAGDRIPLMLTSVLKYLAHCFTSEESETKLQILNTAAKVLLCAKGADRTTIEKVVNFVLELAKCDADYDVRDRARALAKILSTLLFSQNHNVNDNSFRTEAAHVVAEKIFGPPKGSLYPEPVNHRFYLPGSLSQIVLHAAPGYEPLPKPCSLHYSDIVQGTGLSKESDITDNSETLSGSLDVESASGYSSQHSDSGSSFSDGSKDSGYATEADDNADPLIEISDSRTPYKGQNGDGGESNYSQSESSGVESILSKRALESWLGEQPVSLDLKPSEHDQAQRSARIFISDISSRVKPKSYTLLDAASGQGLKIDYSFSSQMSDISPLLVCVEVFFKNCSNASLSKVILVDDGSNRGPDSTEQSSVTTERSSHSHDTVPTLVPMEEIDSVEPDQIIKRILHVRFHHHLLPLKLSVWCSGKKHVVKLRPDIGYFIKPLEMDIGAFRSKESQLPGMFEYVRRCTFADHIVELNKDKSVNSLPKDAYLVVCESLALKMLSNANLFLVSVDLPLASKLDDASGLCLRFSGEILSNSVPCLITITVEGNCLEPLNVSVKVNCEETVFGLNLLNRVVNFIAESSTSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST