Transcript Information: S_Transcript_82203.p2


Annotated TAIR IDAT3G55480.2
Annotated Gene Nameprotein affected trafficking 2
Annotated Gene Symbol(s)PAT2
Annotation TypeOrtholog
Chromosome Positionchr3:20566372-20571171 | Reverse length=1115
E-Value3.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66950946503599
Replicate 22.3589146067783
Replicate 32.2038489659649
Condition 2: 8 Hour
Replicate 12.6824390336016
Replicate 21.9698483079005
Replicate 33.4856103001856
Condition 3: 24 Hour
Replicate 12.7477840868672
Replicate 23.9911114725643
Replicate 30.79314605047535


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82203.p2 GENE.S_Transcript_82203~~S_Transcript_82203.p2 ORF type:complete len:159 (+),score=9.29,Adaptin_N|PF01602.16|1.4e-16 S_Transcript_82203:196-672(+)
ATGTTCCCCCAATTCGGAGCAACAGCTGAGACGCTGAGCAAAGCATCAACAATGGTGTTTCGCATCGGTACGGACGCTCACCTTTACGACGATCCTGAAGATGTCAACATCGCTCCCCTTCTCGACAGCAAATTCGATAACGAGAAATGCGAAGCTCTCAAACGCCTCCTTGCTCTCATCGCTCAAGGCTTTGATGTCTCCAATTTCTTCCCTCAGGTTGTGAAAAATGTCGCATCCCAATCACTCGAAGTCAAGAAGCTGGTATATTTGTACCTGTTGCATTACGCGGAAAACTATGCTATTAAAGTAACAAATGAATATGTTGCTCCTTTCATTATTTGTACTGATTTTGTCCTCAAGCATCCTGGGCTATACAGTTCTAAGTCAGAAACCTGGGCTATATCCAAGCATCCTGGGCTATACAGTTCTAAGTCAGAAACCTGGGCTATATCCAAGCATCCTGGGCTATACAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82203.p2 GENE.S_Transcript_82203~~S_Transcript_82203.p2 ORF type:complete len:159 (+),score=9.29,Adaptin_N|PF01602.16|1.4e-16 S_Transcript_82203:196-672(+)
MFPQFGATAETLSKASTMVFRIGTDAHLYDDPEDVNIAPLLDSKFDNEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAENYAIKVTNEYVAPFIICTDFVLKHPGLYSSKSETWAISKHPGLYSSKSETWAISKHPGLYS*

Click here to download the sequence:
Link to NCBI Protein BLAST