Transcript Information: S_Transcript_82235.p1


Annotated TAIR IDAT5G15700.2
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5115572-5121609 | Reverse length=1051
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3680883634169
Replicate 25.288300469203
Replicate 34.6504694055484
Condition 2: 8 Hour
Replicate 130.648859142265
Replicate 232.302976079989
Replicate 328.060075514515
Condition 3: 24 Hour
Replicate 13.6233603488713
Replicate 23.8461118398979
Replicate 33.5547847819291


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82235.p1 GENE.S_Transcript_82235~~S_Transcript_82235.p1 ORF type:complete len:1043 (+),score=216.77,RNA_pol|PF00940.15|1.9e-161,RPOL_N|PF14700.2|9e-86 S_Transcript_82235:329-3457(+)
ATGTCCAATAGCAGCCCCCCTTTACTTCCTGCAACTTCAAGGCAGAATTTCGATTGTCCTTTTATAATTCACAAATCTACTCGTAGTTTCCTCACAATCCCACATTTTGATTCCCCAGTTATGTGGAGAAACTTTGCAAAGCAAGCTATTCCCATGAAGGCTAAAACCCCTAAATTGACTTTAAACCCCTTTTCTCTTTCACGCCCTTATTGCTTTCTTGGGGTCTCCCATGATTCAGGTCTTATTGAGAAGTTAAAATTCAGGCCCTTTGATACCGCTTCTTGTAAGAACTTGAAATTTCCTGAGGTGGGTTTTTGTCGAAATGGCGGTTCTTCAGTTAAAGAAGAGATATTTGAGAAACCCATTTCAGGATGCTTGAGTAGTAGTCAAGCTAGTAGTAAGTTTCATGGGTTTTTCCCTAAAGGGTATGCAAGTATTGCCGAGGCTGAAGTGACATCATCTACAGATTTTGAAGATAATATTTCAGTGTTGGATGAAATTCAGGAACTTGTGGAAGAGATGAGGAAAGAGGAGAAGAGGGCGAAATGGCGCGAGTTGCGGCAAAGACAGCCAAAAATTGTGGCGGGTTTGGCTCCTTATAGGTACCAAACCCTTAAGAATAGGCAAGTGAAGCTTGAGACTGAGACATGGCAACAGGCTGTGAATGAGTATAAGGAGCTTTTGAGTGAAATGTGTAAGCATAACTTGGCACCCAATTTGCCTTATGTCAAGTCTTTGTTTCTTGGTTGGTTTGAGCCTTTAAGAGATGCCATTATGGAGGAGCAAGAGCGAATTCGGCAAGGGAAATGCAGAGCTGGTTATGCACCCTATTTTGATCAATTACCTGCTGATATGATGAGTATTATAACAATGCATAAATTGATGGGGATGTTAATGACTGGAAGTGGACATGGCACTGCAAAGGTTGTTCATGCAGCTTGTGCAATCGGTGAAGCCATCGAACAGGAAGTTAGAATACACAAATTCTTGGAGAAAACAAAGAAGAAAAAGGGTGATCAGGATAAAAAGACTGAAGGAGATGATTCTGATTCTTTGCTTCAAGAGCAACAGGAGCTAAGAAAAAATGTGGGTAATTTAATGAAGAAGCAAAAGCCGCGACAAGTCCTGAAAATAGTCTCTTCACATGATGACTCAAGGCCCTGGAGTGCAGAGGCAAGGGCTAAGGTTGGCAGCTGTCTAATAGAATTGCTAGTTAAAACTGCATACATACAACCTCCAGCCAATCAATCAGTTGATGATTCACTTGATCTTCGACCTGCATTTGTGCACACGTTGAGGACTGTCGGTCCTGAGAATAAGAAAGTTACCCGACGATACGGAGTAATTGAATGTGACCCACTGGTTATCAAAGGTCTAGAGAAAACTCCGAGGCACATGGTCATTCCCTATATGCCAATGCTGGTGCCACCAGAAAAATGGACAGGTTATGACAAAGGTGCGTACTTGGTTTTGCGATCGTATGTGATGCGAACTCATGGGTCCAAATATCAGCGCGATGCAGTAAAGAGGGCCCCCAAGAAGCAGCTGGAGTCAGTTTTTGAGGCCCTGGATACTCTTGGAAGTACAAAATGGAGAGTAAACGATAAAGTCCTTAGCATTGTGGATATGATATGGGCAAGTGGAGGTCATTTAGCTGACTTGGTTGATCGTGATGATGTTCCTTTGCCGGAACAACCAGATACAGAAGATGAATTGGAGCTTAGGAAATGGAAGTGGAAGGTCAGATCTGTGAAGAAAGTTAATAGGGAGCGACATTCTCAGCGGTGTGATATAGAACTCAAACTTGCGGTTGCTCGGAAAATGAGGGATGAGGAAGGTTTCTACTATCCACACAACATTGACTTTCGTGGCCGTGCATACCCCATGCATCCATACTTGAACCATCTTGGATCTGACATGTGCCGAGGCATCTTGGAGTTCGCCGAGGGGCGTCCTCTTGGAAACTCAGGATTGCGCTGGCTAAAAATACACTTGGCAAATTTATTTGGTGGTGGCATTGACAAATTATCTCACGAGGGTCGAATAGCATTTGCTGAGAATCATTTGGATGATATCTTTGATTCTGCGGATAAACCACTGGAAGGAAAGCGTTGGTGGTTAAAAGCAGAAGATCCTTTCCAGTGTTTGGCTGTTTGCATTGATTTAGCTGCCGCTCTGAGAAGCTCGTCCCCTCAGTCATTCATTTCTCATATACCAGTTCATCAGGATGGTTCATGCAATGGGTTACAACACTATGCTGCTCTCGGGAGAGACAAGCTGGGAGCAGTTGCTGTTAATCTTGTTGCAGGAGAAAAACCTGCAGATGTTTACTCAGGAATCGCTGCAAGGGTCCATGATATCATGAAAATTGATGCTCAAAAAGATCCTGTGGATTTTCCTGATGCAATACGTGCAAGGCAGTTGATCAATCAGGTGGACAGGAAACTGGTGAAGCAGACAGTAATGACATCAGTTTACGGTGTCACATATGTCGGTGCTAGAGACCAGATCAAGCGGAGGCTGAAGGAACGTAATGTATTCAATGATGATGGGGAGCTTTTTGCTGCATCTTGTTATGCTGCAAAGACTACATTAACTGCGCTTGGAGAGATGTTTCAAGCTGCCCGTGGTATTATGAGCTGGCTCGGTGACTGTGCAAAGATAATTGCATCTGAAAATCAGCCTGTGAGGTGGACAACACCACTGGGTCTCCCTGTTGTGCAACCATACTGCAAGAAAGGCAGACATCTAATAAGAACATCCCTTCAGATGTTGACACTCGAAAGGGAAAGTGAAAAGATTATGGTGAAGCGGCAAAGAACAGCTTTCCCACCAAATTTTGTTCACTCGCTTGATGGTTCGCATATGATGATGACCGCACTAGCTTGCAAAAAAGCAGGATTAAATTTTGCAGGAGTTCATGATTCGTATTGGACACATGCATGTGATGTTGATCAAATGAGCAGGATACTTAGGGAGAAATTTGTGGAACTTTATGAGCAACCAATACTGGAAAAGTTGTTAGAGAGTTTCCAGCAATCTTTCCCTACATTATCCTTCCCTCCTTTGCCAGAGCGAGGAGACTTTGATCTGAGAGAAGTTTTGGGCTCGCCATATTTCTTCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82235.p1 GENE.S_Transcript_82235~~S_Transcript_82235.p1 ORF type:complete len:1043 (+),score=216.77,RNA_pol|PF00940.15|1.9e-161,RPOL_N|PF14700.2|9e-86 S_Transcript_82235:329-3457(+)
MSNSSPPLLPATSRQNFDCPFIIHKSTRSFLTIPHFDSPVMWRNFAKQAIPMKAKTPKLTLNPFSLSRPYCFLGVSHDSGLIEKLKFRPFDTASCKNLKFPEVGFCRNGGSSVKEEIFEKPISGCLSSSQASSKFHGFFPKGYASIAEAEVTSSTDFEDNISVLDEIQELVEEMRKEEKRAKWRELRQRQPKIVAGLAPYRYQTLKNRQVKLETETWQQAVNEYKELLSEMCKHNLAPNLPYVKSLFLGWFEPLRDAIMEEQERIRQGKCRAGYAPYFDQLPADMMSIITMHKLMGMLMTGSGHGTAKVVHAACAIGEAIEQEVRIHKFLEKTKKKKGDQDKKTEGDDSDSLLQEQQELRKNVGNLMKKQKPRQVLKIVSSHDDSRPWSAEARAKVGSCLIELLVKTAYIQPPANQSVDDSLDLRPAFVHTLRTVGPENKKVTRRYGVIECDPLVIKGLEKTPRHMVIPYMPMLVPPEKWTGYDKGAYLVLRSYVMRTHGSKYQRDAVKRAPKKQLESVFEALDTLGSTKWRVNDKVLSIVDMIWASGGHLADLVDRDDVPLPEQPDTEDELELRKWKWKVRSVKKVNRERHSQRCDIELKLAVARKMRDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDMCRGILEFAEGRPLGNSGLRWLKIHLANLFGGGIDKLSHEGRIAFAENHLDDIFDSADKPLEGKRWWLKAEDPFQCLAVCIDLAAALRSSSPQSFISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVAGEKPADVYSGIAARVHDIMKIDAQKDPVDFPDAIRARQLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERNVFNDDGELFAASCYAAKTTLTALGEMFQAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYCKKGRHLIRTSLQMLTLERESEKIMVKRQRTAFPPNFVHSLDGSHMMMTALACKKAGLNFAGVHDSYWTHACDVDQMSRILREKFVELYEQPILEKLLESFQQSFPTLSFPPLPERGDFDLREVLGSPYFFN*

Click here to download the sequence:
Link to NCBI Protein BLAST