Transcript Information: S_Transcript_82386.p1


Annotated TAIR IDAT3G53920.1
Annotated Gene NameRNApolymerase sigma-subunit C
Annotated Gene Symbol(s)SIGC, SIG3
Annotation TypeHomolog
Chromosome Positionchr3:19961041-19963820 | Reverse length=571
E-Value4E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.801611181362
Replicate 229.417052743353
Replicate 331.884052212326
Condition 2: 8 Hour
Replicate 117.831399813196
Replicate 217.316063636399
Replicate 318.06427763134
Condition 3: 24 Hour
Replicate 139.123322409708
Replicate 237.260842761114
Replicate 335.980600069445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82386.p1 GENE.S_Transcript_82386~~S_Transcript_82386.p1 ORF type:3prime_partial len:354 (+),score=76.31 S_Transcript_82386:155-1213(+)
ATGGGTTTGGGTTGCAAACTGAACATGATCAGATGGGGTGTTCCCTCAGTTCATTCTCCTTTTGCCACCACCAACTCCTCCTCTTCTCTTTGCTGCTCTCCTTCATTTAGAGGTAAAGAGCTTGATTTTGGGCCAGCACGATTATCCCTTTTGGCTATTGGCTTTGATGAGAATGAAACACTGCATAAAGATTCGTCCAGACCACAGGCATGCTCATCGTCAGCTGCACAGACTGTTGAAAATGACTACTCAAACATGGAGATGATAGTTGGGAAGAGAAACTGCAAAGGTTTGCATAATATGATCAATGATACTCAAATACCTTGTGACAAGGACACATCTGTGTTCGTTCGAAGTATACAAGCATGCAGTGGTTCCCACTTTCATCTACTAATGGAGAATATCAATGTACTGGAGAATCGGATTGCTGATCCAGACTTGGTGAAGCTTGAAAAAGATATTTTAGTGCATTTAGGAAGGCTTGGGGCACTTGAGCTGTTTCATACATGCTTATCTAAGAGCCTTGCCGATCCTACTCTCACCAATATGTCAAAATCACAAGCTGAGCCCACTGGAAATTGCCAATTGAAAAGGCAGATGGTTCCTAGTTCAGTTAAAAATATGGTTTGCTCTAAGAGGAAAGAGGAAAGGAAAAAAAGACAATATAGGAGGATGCAAATGTCCAGTAAGAAGTATGCCTCTATGCCGGAAAGTTCTGCTGAAGGTTCTGTGGAGCCTTCGGTTTCTTCTGCAGTAAAGAAGACTAAGACCGTGGGTAGAAGAGTGATGGTTGCCAATAATGAGGCAGAAATGTCCAAGGGAATTAAGGTAGTTGCAAATTTGGAAAGGGTGAAATCAAAAATGGAAAAGGAAATGGGGGGAACAGTGAGTTTATGTACTTGGGCTGAAGCAGCTGGCATTGATGACAAGGTTCTGCAGCACTACCTGCACTTTGGGTGGTACTGCAGGGATAAAATCCTCAAAAGTGGCCGCTCCTTAGTGGTGTACCTTGCAAGAAATTACCGGGGACTAGGAGTATCATATGAAGACTTAATTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82386.p1 GENE.S_Transcript_82386~~S_Transcript_82386.p1 ORF type:3prime_partial len:354 (+),score=76.31 S_Transcript_82386:155-1213(+)
MGLGCKLNMIRWGVPSVHSPFATTNSSSSLCCSPSFRGKELDFGPARLSLLAIGFDENETLHKDSSRPQACSSSAAQTVENDYSNMEMIVGKRNCKGLHNMINDTQIPCDKDTSVFVRSIQACSGSHFHLLMENINVLENRIADPDLVKLEKDILVHLGRLGALELFHTCLSKSLADPTLTNMSKSQAEPTGNCQLKRQMVPSSVKNMVCSKRKEERKKRQYRRMQMSSKKYASMPESSAEGSVEPSVSSAVKKTKTVGRRVMVANNEAEMSKGIKVVANLERVKSKMEKEMGGTVSLCTWAEAAGIDDKVLQHYLHFGWYCRDKILKSGRSLVVYLARNYRGLGVSYEDLIQ

Click here to download the sequence:
Link to NCBI Protein BLAST