Transcript Information: S_Transcript_82473.p1


Annotated TAIR IDAT1G23980.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8484879-8485988 | Reverse length=369
E-Value4E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8782394496723
Replicate 27.1943878991896
Replicate 37.6176518606176
Condition 2: 8 Hour
Replicate 110.096078507628
Replicate 210.267273530309
Replicate 310.040073147274
Condition 3: 24 Hour
Replicate 17.5454549254951
Replicate 27.8283213898978
Replicate 37.6762743841658


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82473.p1 GENE.S_Transcript_82473~~S_Transcript_82473.p1 ORF type:complete len:414 (+),score=65.56,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|1.7e-09,zf-rbx1|PF12678.3|1.8e-08,zf-C3HC4|PF00097.21|5e-06 S_Transcript_82473:643-1884(+)
ATGTCTAAATTAGACACCCAATTGAAGGAAAGTGGTGGTAGTAGTAGTAATATTTTGACACCTCCACCTCTTTTCTCCCCCTTACCTTCATTCCCATCTCATTCCAATACTAGTAGTAGTAGTAGTAATAGTAGTAAAATTAGTCCAATTGTTCTATTGGTTATAGTAATTCTAGCTGTAGTATTCTTTGTGTCAGGTATACTTCATCTCTTAGTTAGGTTCCTTATGAAAAGGCCCTCATTTTATTCCTCAGTTTCACATTCTAATAGACACCCAGAAAACCCAGGCTCTGATACTCTTCAAAGACAGCTTCAACAGCTCTTTAGGTTGCATGATTCAGGTCTAGACCAAGCTCTTATTGATGCTTTGCCTGTTTTTTATTACAAGGATATAATGGGTTTGAAGGAGCCCTTTGATTGTGCAGTTTGTCTTTGTGAATTCTCAGACCAAGATAAGCTCAGATTGCTTCCTGTGTGTAGTCATGCTTTCCACATTACTTGTATAGATACTTGGCTTTTGTCAAATTCGACCTGTCCCCTTTGTAGAGGGAGTTTATTGAGCTCAGATTTCGAGAACCAGGAGTTCAGCTTGGATTACTGGAGGGAATGGTCGTTCGGCTGTTCCATTGATCGCGATTATAATAGTAATAGTGGTAGTAACATTAATAGTAATGGTAACAATGTCTCGCAACGTTTTGTTGGTAATCATAATAAGCCTACAATCATGGAAGAGAACGCGAATGAGAGGAGGGTTTTCTCTGTAAGGCTAGGCAAGTTTCGGAGCTTGAATGATGGGAACGGAGAGACTCAGACGAATACTAAGGAAAGCGAAAGTAATAATGCTGAGACGAGTATTGGGACTAGTAGCACTAGTAGTCAAATAGATGCAAGAAGATGTTATTCACTAGGGTCATATCAGTATGTGCTTGCTGATTCAAATTTGCAAGTGGCATTGTCAAGTGAGGCAGGGGGTGCTAATGGTGGTACTACTAATAGTGTTGTAAAGATGGAGAAAATTATGGGACAAAGTGAAAATTGTTTAGTTGATGGAGATGTTGAAGGGAAGAAGATTAGTAGGAGAAATAGAGGGGACAGTTTCTCAGTATCCAAGATATGGCTTTGGTCCAAGAAGGGTAAATTCCCAGGTTCTTCAGATACCAATGTTGTTCATCATGTTCATGGTGGTCCTCGCTCTCTTAATGTTGTCTTGCCATTGTCTAGTAGGGATCAGGACCTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82473.p1 GENE.S_Transcript_82473~~S_Transcript_82473.p1 ORF type:complete len:414 (+),score=65.56,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|1.7e-09,zf-rbx1|PF12678.3|1.8e-08,zf-C3HC4|PF00097.21|5e-06 S_Transcript_82473:643-1884(+)
MSKLDTQLKESGGSSSNILTPPPLFSPLPSFPSHSNTSSSSSNSSKISPIVLLVIVILAVVFFVSGILHLLVRFLMKRPSFYSSVSHSNRHPENPGSDTLQRQLQQLFRLHDSGLDQALIDALPVFYYKDIMGLKEPFDCAVCLCEFSDQDKLRLLPVCSHAFHITCIDTWLLSNSTCPLCRGSLLSSDFENQEFSLDYWREWSFGCSIDRDYNSNSGSNINSNGNNVSQRFVGNHNKPTIMEENANERRVFSVRLGKFRSLNDGNGETQTNTKESESNNAETSIGTSSTSSQIDARRCYSLGSYQYVLADSNLQVALSSEAGGANGGTTNSVVKMEKIMGQSENCLVDGDVEGKKISRRNRGDSFSVSKIWLWSKKGKFPGSSDTNVVHHVHGGPRSLNVVLPLSSRDQDLA*

Click here to download the sequence:
Link to NCBI Protein BLAST