Transcript Information: S_Transcript_82534.p1


Annotated TAIR IDAT1G04590.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1258760-1261411 | Reverse length=384
E-Value1.2E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9496704201597
Replicate 24.121620027228
Replicate 33.9857927799723
Condition 2: 8 Hour
Replicate 13.8276341594854
Replicate 23.7696155217122
Replicate 33.9040013928537
Condition 3: 24 Hour
Replicate 12.400536647318
Replicate 23.7357931169803
Replicate 32.9564301134202


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82534.p1 GENE.S_Transcript_82534~~S_Transcript_82534.p1 ORF type:complete len:273 (+),score=54.79 S_Transcript_82534:262-1080(+)
ATGTTGAAATCAGCAGCAGTATACTTGTTTCGTCAGCACACACAGCTTGGGATGCTAAGATGTCAAGCCCCAAGAATGTGCTTCAGTACAATGCTCCAATCCGAGGGTCTAAACCAGCTTCAATCAAATGATTTTGGCAAGATTTATAGAAATGAGTTGAGCTTCCCCGTGGGACAGAAGATCTCAAGGAGAGAAAAGATCAAGTTTTTGATCAAAACTCTTTTAGATCTTGAAAACAGTAAAGATGCTGTCTATGGAACACTTGATGCTTGGGTAGCATGGGAGCAAAACTTTCCTATTGCAAGGCTCAAGAATGTAATACTTGCCTTGGAGAAGGAGCAACAATGGCACAGAGTCGTACAGGTCATAAAATGGATGTTAAGCAAAGGTCAAGGTAACACATTGGGAACTTACCAGCAACTACTACGAGCTTTGGATATGGACCACAGAGCTGAAGAAGCGCATAGTTTCTGGATGAAAAAGATTGGCAATGATCTTCATTCAGTTCCTTGGCAAACATGTCGTCTCATGATATCGATTTATTATAGAAACAATATGTTGGACCGTCTTGTCAAGCTTTGTAAGGGTCTTGAGGCTTTTGATCGTAAACCTCCTGAGAAGTCAATAGTGCAGAAGGTGGCAGATGCATATGAATCCTTGGGCATGATGAATGACAAAGAAAGGATCTTGCAAAAGTATGCTGATCTCCTCAGCAAGACAAGGAAAGAAACCGATAAGAAATCCAATAGAGTGAAGTCTAAAAGGAAGGATTCTTCATCAGCTATTAGGGACCGCCCTGCTAAGGCTTCAGATACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82534.p1 GENE.S_Transcript_82534~~S_Transcript_82534.p1 ORF type:complete len:273 (+),score=54.79 S_Transcript_82534:262-1080(+)
MLKSAAVYLFRQHTQLGMLRCQAPRMCFSTMLQSEGLNQLQSNDFGKIYRNELSFPVGQKISRREKIKFLIKTLLDLENSKDAVYGTLDAWVAWEQNFPIARLKNVILALEKEQQWHRVVQVIKWMLSKGQGNTLGTYQQLLRALDMDHRAEEAHSFWMKKIGNDLHSVPWQTCRLMISIYYRNNMLDRLVKLCKGLEAFDRKPPEKSIVQKVADAYESLGMMNDKERILQKYADLLSKTRKETDKKSNRVKSKRKDSSSAIRDRPAKASDT*

Click here to download the sequence:
Link to NCBI Protein BLAST