Transcript Information: S_Transcript_82536.p1


Annotated TAIR IDAT1G04590.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1258760-1261411 | Reverse length=384
E-Value2E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2919970414359
Replicate 210.1713199316
Replicate 310.940606151289
Condition 2: 8 Hour
Replicate 114.602470657833
Replicate 214.484824034535
Replicate 311.99468034721
Condition 3: 24 Hour
Replicate 110.293012898958
Replicate 29.1423511104588
Replicate 312.055282241089


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82536.p1 GENE.S_Transcript_82536~~S_Transcript_82536.p1 ORF type:complete len:295 (+),score=50.67 S_Transcript_82536:269-1153(+)
ATGTTGAAATCAGCAGCAGTATACTTGTTTCGTCAGCACACACAGCTTGGGATGCTAAGATGTCAAGCCCCAAGAATGTGCTTCAGTACAATGCTCCAATCCGAGGGTCTAAACCAGCTTAAATCGAATGATTTTGACAAGATTGATAGAAACGAGTTGAGCTTCCCCGTGGGACAGAAGATCTCAAGGAGAGAAAAGATCAATTTTTTGATCAAAACTCTTTTGGATCTTGACAACAGTAAAGATGCTGTCTATGGAACACTTGATGCTTGGGTAGCATGGGAGCAAAACTTTCCTATTGCAGCGCTAAAGAATGTAATACTTGTGTTGGAGAAGGAGCAACAATGGCATAGAGTCGTACAGGTTATAAAATGGATGTTAAGCAAAGGTCAAGGTAACACATTGGGAACTTACCAGCAACTACTACGAGCTTTGGATATGGACCACAGAGCTGAAGAAGCGCATAGTTTCTGGATGAAAAAGATTGGCAATGATCTTCATTCAGTTCCTTGGCAAACATGTCGTCTCATGATATCGATTTATTATAGAAACAATATGTTGGACCGTCTTGTCAAGCTTTGTAAGGGTCTTGAGGCTTTTGATCGTAAACCTCCTGAGAAGTCAATAGTGCAGAAAGTGGCAGATTCATATGAAACCTTGGGCATGATGGATGACAAAGAAAGGATCTTGCAAAAGTATGCTGATCTCCTCAGCAAGACAAGGAAAGAAACCGATAAGAAATCCAATAGAGTGAAGTCTAAAAGGAAGGATACTTCATCAGCTATTAGGAACCGCCCTGCAAAGGCTTCAGTGGACTGCCCATTCGAAGGTATTTTGCGGAGGCCTAAACGCCCCTTGTTGGCTACGACAACAGTTGCACTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82536.p1 GENE.S_Transcript_82536~~S_Transcript_82536.p1 ORF type:complete len:295 (+),score=50.67 S_Transcript_82536:269-1153(+)
MLKSAAVYLFRQHTQLGMLRCQAPRMCFSTMLQSEGLNQLKSNDFDKIDRNELSFPVGQKISRREKINFLIKTLLDLDNSKDAVYGTLDAWVAWEQNFPIAALKNVILVLEKEQQWHRVVQVIKWMLSKGQGNTLGTYQQLLRALDMDHRAEEAHSFWMKKIGNDLHSVPWQTCRLMISIYYRNNMLDRLVKLCKGLEAFDRKPPEKSIVQKVADSYETLGMMDDKERILQKYADLLSKTRKETDKKSNRVKSKRKDTSSAIRNRPAKASVDCPFEGILRRPKRPLLATTTVAL*

Click here to download the sequence:
Link to NCBI Protein BLAST