Transcript Information: S_Transcript_82624.p1


Annotated TAIR IDAT1G68890.1
Annotated Gene Namemagnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25896988-25906553 | Forward length=1715
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.159946169834
Replicate 234.018086746553
Replicate 334.676668766904
Condition 2: 8 Hour
Replicate 146.847988946265
Replicate 254.63677607491
Replicate 351.986388798749
Condition 3: 24 Hour
Replicate 140.451455106954
Replicate 237.450335209492
Replicate 335.805163539926


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82624.p1 GENE.S_Transcript_82624~~S_Transcript_82624.p1 ORF type:complete len:1194 (+),score=227.73,MR_MLE_C|PF13378.2|2.8e-23,Abhydrolase_6|PF12697.3|9.6e-21,TPP_enzyme_M_2|PF16582.1|1.5e-20,Abhydrolase_1|PF00561.16|8.1e-16,Abhydrolase_5|PF12695.3|7.1e+03,Abhydrolase_5|PF12695.3|2.4e-13,TPP_enzyme_C|PF02775.17|8.7e-10,Hydrolase_4|PF12146.4|4.3e-09 S_Transcript_82624:1680-5261(+)
ATGGTTCTCACAACAATTGATTCTGCTGTACACTGGGCTACTTGTTCACCGTGTGGTCCTGTTCATGTGAATTGTCCTTTCAGGGAACCACTGGAAAATAGTCCCAGAGATTGGAAAGGAAGCTGTTTAGATGGACTGGATGTATGGATCTCAAGCATTCAACCATTTACCAAATACATGCAAGTGCAATCTTCTCTAACACATAGTGCTACCATAGGCTTAACAACAGAGGTTGGAAAGATAATTGAGAATGCTATGAACGGGCTTTTAGTAATTGGTGCTATCCACAAAGAAGATGAAATTTGGGCAGCTCTTCTATTAGCCAGACATCTTTCGTGGCCTATTGTTGCAGACATCTTGTCTGGATTACGACTACGAAGGTTAATGACATCTTATCCTGAATATGAAGAAAATTTCATTTTTCTTGATCATTTTGATCATGTGCTCCTCTCTGACATAGTAAGGGAGCGGATGCGAATTGATGTAATCATTCAGGTAGGGAGCAAAATAACGAGCAAGAGGGTTTCCGATTTGCTGGAACAATGTTTTCCATGCTCCTATATCATGGTTGACAAACATCCTTGTAGACATGATCCCTCGCATATAGTGACACACAGGTTCCAGAGCACAATCTGCCAATTTGCTGGATGTCTGCTGAAAGGCACCTTACCACGCAAGAACAGCAAATGGATTAGTTTTCTGAGAGCTTTGAATTCAATGGTTGCATGGGAGTTATCTTTTCAGATCAGCTCTGAGTACGCACTCACTGAACCTCATGTTGCACATGCCCTCTCAGAAGCGCTTGTCTCAGGGACTGCTTTGTTTATTGGAAATAGTATGCCAATCCGTGATGCAGACATGTATGCTCAAGGTGTTGTAAGTGATAGGGGCAAAGCACCTCAGTTGAAACTACCATGTCACTGGATAAGTATAGCTGGCAATCGGGGAGCTAGTGGTATTGATGGTTTGCTGAGCACAGCTACTGGTTTTGCTGTAGGATGCAAGAAAAGAGTTCTGTGTGTGATGGGAGATGTTTCCTTTCTTCATGACACAAATGGATTGGCAATCCTCAGCTCAAGGATGTTGCGGAAACCGATGACAGTAGTTGTCATAAACAATAGAGGTGGTGGGATCTTCAGTTTTCTTCCTCTTGCAGAAAAAGCTGAGCCAAAAGTTCTGGAGAAGTACTTTTACTACAATCATGGCATTTCATTAAGCAAGCTGTGTGCAGCACATGGTGTGAAGCATGTGTTAGTGGAAACTAAAGTGGAACTTCAAGAGGCTTTATTAACATCACAAAAGGCAGACACAGATCGTGTTATAGAAGTTACAAGCTCCATCAACAGTAATTCCACATTTCATAGTGTCTTGAGAAATTGTGCAAGTCAAGCAGCAACTCATGCTTTCACAAATCTGTTGCGACTTCCTACTCCAGAATCTGCTCAACATGATTTCTGTTTGTGCAAGATTGCGAAATTGGAGTACATATTGTATGGAGTCAACCTAACTGCTCCACCAACTTCAGTTTCAGTCAAAAGTAGACCATCTGATCTACGTAGACAAGGTTTCATATTAGAATTGACGCTTGATGATGGCAGTACTGGGTTTGGCGAGGTTGCGCCCCTTGAAATTCAGGAAGAGAACTTGCAAGATGTGGAGGAGCAATTGCGGTTTCTAGTGCACGCACTAAAAGGAGCTACTGTTACCTCTCTCCTTCCCCTGTTGAGAAATTCCTTTTCTTCATGGATATGGAGTACCATAGGAGTCCCACCATCTTCTATATTCCCAAGTGTCCGTTGCGGTCTAGAGATGGCCGTTTTGAATGCTATAGCTGCAAAGAAAAAATGTGCATTGCTTGAAATTCTTTGGCCACAATTGGATAAAGGTGAGTTGATCAATCAGCAACCACCAAGCATTGACATCTGTGCCCTTGTCGATTCTGAAGGAAATCCAGCTGAAGTTGCTGCTGTTGTCTCTGCACTTGTTGAGGAAGGATTTCGTGCAGTAAAACTGAAAGTGGCACGTAGGGACCATCCAAGGGAAGATGCTGCAGTTATAAAAGAAATAAGAAGAAAGGTCAGTGTGCAGATTGAGCTTCGTGTGGATGCTAACCGTAAATGGACCTATGAAGAAGCCATTGAATTTAGCTCTCTTGTGAAGGACTGTGGGTTGCAATATATTGAGGAGCCAGTTGAGCGTGAAGAGGATATTGTGAAGTTTTGCGAAGAGAGTGGCCTGCCTGTGGCACTAGATGAGACTGTCGACAAAATACAAGGAAATATTCCTGATTCTTTAGCCCGGTTCACTCATCCTGGAATAGTGGCTCTTGTCATAAAACCGAGTTTTGTTGGTGGTTTCGAGAATGCATCGGTAATATCATCATGGGCTCATACTAAGGGAAAACTGGCTGTTGTCAGTTCAGCCTTTGAAAGTAGCCTCAGTTTGTCTTCCTATGTTCAACTTGCATGTTTCTTTGAGATGAGAAGGGCAGAGATTTTTCAAGCATCAGATAAGAAAATGACTAAATGTGTAGCGCATGGTCTTGGAACATACAAATGGCTTAAAGAAGATGTAACAAAAGACCCTCTTGTCATATCTCTACAACCAGGCAATAAATATCTTGGAGCATCTATCGCTGATGCTGATCGTGTCCTCCGTAAATTTCAAATTAATCAAAATGTTACTTCAAAAAAATGTATTGACGAGCATATATCAACATATCAGCTCATCATGCAATCAGAGGAGTTTTCTTTTCAGATCAAAGTGCAAGAGACTGGAACGAGCATAGGGGATAATGTACTCCTATTTCTTCATGGTTTCCTGGGAACTGCTGAAGATTGGACTCCTGTCATGAAAGCACTGTCAGGCTCTGCTAAATGCATCTCCATTGACCTTCCTGGCCATGGGAAGTCAAAAGTAGAATTCCAGGACAGTGTGGATGCAACGAAAGATAAAAGGTTATCAATTGACATACTTGCTGCCATATTGAGTGAATTGATAGATAAAATAGCTCCAGGCAAAGTAACGCTGGTTGGATATTCCATGGGAGCAAGGATAGCATTGTACATGGCATTACGATTATGTGGCAAGATTGATCGAGCCATAGTGATTTCTGGAAGTCCTGGGTTGAAAGATGAGACGGCGAGAAACATCCGTGCTGCTAAAGATGATTCCCGGGCACAGGCACTCCTCTCATTTGGTTTGGTACCCTTTCTGAATAACTGGTATCATGGTGATCTGTGGCAGAGCTTTAGGGAACACCCCAGATTCAAGAATATTGTAGCCCGCCGCTTGCAGCACGATGATATTCATGGTCTGGCAAGAACTATGTCTGATTTGAGTATAGGAAGGCAGCCATCCCTGTGGGAAGACTTGAAACATTGCAAAATACCGCTCTTGCTTATTTCTGGATCAAGAGATGTGAAATTCAGGAATATTAATCGGGATATCTGCAAAAGCATCAGTCAGGATGTATGTCACGAAGCTGTTCAGATTCCCAACTGTGGACACGCTGTTCATCTTGAGAACCCTCTCACTCTTGTCAGATTAGTGAGGCAGTTTTTGACAAAAACTAGCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82624.p1 GENE.S_Transcript_82624~~S_Transcript_82624.p1 ORF type:complete len:1194 (+),score=227.73,MR_MLE_C|PF13378.2|2.8e-23,Abhydrolase_6|PF12697.3|9.6e-21,TPP_enzyme_M_2|PF16582.1|1.5e-20,Abhydrolase_1|PF00561.16|8.1e-16,Abhydrolase_5|PF12695.3|7.1e+03,Abhydrolase_5|PF12695.3|2.4e-13,TPP_enzyme_C|PF02775.17|8.7e-10,Hydrolase_4|PF12146.4|4.3e-09 S_Transcript_82624:1680-5261(+)
MVLTTIDSAVHWATCSPCGPVHVNCPFREPLENSPRDWKGSCLDGLDVWISSIQPFTKYMQVQSSLTHSATIGLTTEVGKIIENAMNGLLVIGAIHKEDEIWAALLLARHLSWPIVADILSGLRLRRLMTSYPEYEENFIFLDHFDHVLLSDIVRERMRIDVIIQVGSKITSKRVSDLLEQCFPCSYIMVDKHPCRHDPSHIVTHRFQSTICQFAGCLLKGTLPRKNSKWISFLRALNSMVAWELSFQISSEYALTEPHVAHALSEALVSGTALFIGNSMPIRDADMYAQGVVSDRGKAPQLKLPCHWISIAGNRGASGIDGLLSTATGFAVGCKKRVLCVMGDVSFLHDTNGLAILSSRMLRKPMTVVVINNRGGGIFSFLPLAEKAEPKVLEKYFYYNHGISLSKLCAAHGVKHVLVETKVELQEALLTSQKADTDRVIEVTSSINSNSTFHSVLRNCASQAATHAFTNLLRLPTPESAQHDFCLCKIAKLEYILYGVNLTAPPTSVSVKSRPSDLRRQGFILELTLDDGSTGFGEVAPLEIQEENLQDVEEQLRFLVHALKGATVTSLLPLLRNSFSSWIWSTIGVPPSSIFPSVRCGLEMAVLNAIAAKKKCALLEILWPQLDKGELINQQPPSIDICALVDSEGNPAEVAAVVSALVEEGFRAVKLKVARRDHPREDAAVIKEIRRKVSVQIELRVDANRKWTYEEAIEFSSLVKDCGLQYIEEPVEREEDIVKFCEESGLPVALDETVDKIQGNIPDSLARFTHPGIVALVIKPSFVGGFENASVISSWAHTKGKLAVVSSAFESSLSLSSYVQLACFFEMRRAEIFQASDKKMTKCVAHGLGTYKWLKEDVTKDPLVISLQPGNKYLGASIADADRVLRKFQINQNVTSKKCIDEHISTYQLIMQSEEFSFQIKVQETGTSIGDNVLLFLHGFLGTAEDWTPVMKALSGSAKCISIDLPGHGKSKVEFQDSVDATKDKRLSIDILAAILSELIDKIAPGKVTLVGYSMGARIALYMALRLCGKIDRAIVISGSPGLKDETARNIRAAKDDSRAQALLSFGLVPFLNNWYHGDLWQSFREHPRFKNIVARRLQHDDIHGLARTMSDLSIGRQPSLWEDLKHCKIPLLLISGSRDVKFRNINRDICKSISQDVCHEAVQIPNCGHAVHLENPLTLVRLVRQFLTKTSK*

Click here to download the sequence:
Link to NCBI Protein BLAST