Transcript Information: S_Transcript_82706.p1


Annotated TAIR IDAT5G57460.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to 166 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23275321-23277261 | Forward length=646
E-Value3E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.075987959369
Replicate 212.727335583954
Replicate 311.835606372409
Condition 2: 8 Hour
Replicate 113.926171673953
Replicate 213.126500753352
Replicate 313.078129348613
Condition 3: 24 Hour
Replicate 111.061090512163
Replicate 210.133185147676
Replicate 39.4627134157417


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82706.p1 GENE.S_Transcript_82706~~S_Transcript_82706.p1 ORF type:5prime_partial len:709 (+),score=146.16,muHD|PF10291.5|5.6e-12 S_Transcript_82706:3-2129(+)
ACAAGTGTCAAGTACCCACCAGCAAGAAAAAAAAAAAAAAACACCAAAAGACTTTTGAACTGGACCAAAAACCAGATCGAATCGAACGAACCCAACCAAACCCCCATTTCTCTTTCTCTCTGGTTGCCCGGAACCTCGATTGATCGATTGATCTCCGGCAATTCCAATTCCAGATCCACCAGATCTCCACTTCCACCACCTATGTCCTGCTTAGCACTCTCTCTCCAACCCATCAATGGCTCCGACATCCTTCTGCAAACCCGCGAATGGTTCCCTCCCGCCCGTGCTCTCGTCGCACTCTCCGCTTTTCGCAACACCCGTCTCGCACTCTCCTCATCTCACCACCACCACCACTCCAAAAACCATCAAAACGACGACGTCGTGGGGGACCCAACACTTGTCGGGGACGACCCACTAGCAGCCTCAAGCGGTCAGGTAATTGTCGGTGTCGAATCTCGTTACCGAGTTGTTTACCGTTTGGTTAATTCCATTTATGTCCTTGGTGTTACCACTGTTGATGATGATGACAATAATAGCACTACTAATAATGTGTTTGAGTGCATTAGTATTGTTAATCAAGCTGTTAGTGTTGTCGTCACCGCTTGTCGTGGCGTTGACGTCACACCGGAGAAATTGGGAAAGAAATATGCTGAGATTTATATGGCTTTGGATATTGTCTTGAGGGGGGTTAGTAATATTAGGTTGGCTGCTATGTTGGCTTCTATGCATGGGGAGAGTATTGCTAAGATGGTTCATAGTGCTGTTGATTCCGAGAATAAGGTTAGAGGGGCTGACACTTGGGTGGCTCTTGAGGGGGTTGCGGTCGAGCGTGAGGCTGGGGTGGAGTCGTTTTCAAATGCTCGGTTTGAGCTGCCCCCTGAGACCCTGGCCGCCGGTGATGAGGTGTCGGCGAGTATTGCGCCTGGGTTGGGTGAGCAGGAGGCGGGGCAGTTGAAGGTGGAGGAGGGTGGTCAGGAGGTTAAGGACCCGTTTGCAGCGAGCGAGGCGGTTAATAAGCCCGAGTCGCTCATGGGGGACTTTAAGAAGGATAAGGATGCTGTGTCGGATGTGACCAAGGCGCTTGTGGGGCTTGAGGTGACTCCTTTGCCTCCTGCCGAGGCTGCCCAGCCTACCCACATTGCGGTGGAGGGCTTTGAAGGGGATTATGGTGGGATTGAGTTTGGGAATGATGAGGCATCGTTGAGGGAGACTTTTGAAGGGTTTAGTGATGCTTTTGGTGGTGGGTTGGATGCTTCCGAGTTTGTGGGGCCTACTAAGGTTGCCAAGAGGGAGGGTCTTGGCGGGCTCGAGTTGTTGCAGACAGGGCCTGATGGAGCGCCTGTGGCTGCTGCTGGGGCAGGTGCTACTCCTCTTGAGAATCTCTTGGTGCAGAAGACGGAAATGAAGGGCCCTGAGATGTACGTTTCTGAGGAGATTAGTGCTGAGTTCAGGGAATCCTTGCTTGCTCGAGTGGGATTGATGGGTGTGATTTACTTGAGGACGTTGCCTCCTAAGATGTCTGGTGACAAAGAGACTGAGTTTTCGTTTAGGATTGATGGTACTAATGCTTTTAAAAGAGTTGTTATGCAAAGCTCTCGAGTTAGTAGTCTTGGCAATGGACAGTTTCATGTAAGGACAGCTGCCGCTGAAGAGCCAATACCTGTTCTGAAGTATAGTTTGTTGCCTCAGATGACTCCAATTCCTTTGCGTGTTCGGCTTGTTAAGCGCCACATTGGGACCTTACTCTCTGTGATGATACAGTACGTTTCCAATCCTGAGTTGCCAGAACCCCTCACTGATGTCACGTTCATTCTCAAACTACCAGTTGATCCAACACTGCTGAAGGTTTCTCCTAAGGCTGTCCTGAACAGATCTGAGAGAGAACTGAAATGGCACGTGCAAGAAATTCCATTGAAGGGTACACCTGGAAAGCTCAGGGCCCGGATGCCAGTTGATATAAACGAGGAGGATACCGAGGAAGAAATTGACGTCGTCTGTCATGTCAAATTTTCTTTGAAATGGACAAAATCACTCTCTGGTGTTTCTCTTTGGCCTGCTACTGAAGGTAAAACAGACTTTCACATGGTAGATAACAAGGTTGAAAGCGGCACTTACATATGTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82706.p1 GENE.S_Transcript_82706~~S_Transcript_82706.p1 ORF type:5prime_partial len:709 (+),score=146.16,muHD|PF10291.5|5.6e-12 S_Transcript_82706:3-2129(+)
TSVKYPPARKKKKNTKRLLNWTKNQIESNEPNQTPISLSLWLPGTSIDRLISGNSNSRSTRSPLPPPMSCLALSLQPINGSDILLQTREWFPPARALVALSAFRNTRLALSSSHHHHHSKNHQNDDVVGDPTLVGDDPLAASSGQVIVGVESRYRVVYRLVNSIYVLGVTTVDDDDNNSTTNNVFECISIVNQAVSVVVTACRGVDVTPEKLGKKYAEIYMALDIVLRGVSNIRLAAMLASMHGESIAKMVHSAVDSENKVRGADTWVALEGVAVEREAGVESFSNARFELPPETLAAGDEVSASIAPGLGEQEAGQLKVEEGGQEVKDPFAASEAVNKPESLMGDFKKDKDAVSDVTKALVGLEVTPLPPAEAAQPTHIAVEGFEGDYGGIEFGNDEASLRETFEGFSDAFGGGLDASEFVGPTKVAKREGLGGLELLQTGPDGAPVAAAGAGATPLENLLVQKTEMKGPEMYVSEEISAEFRESLLARVGLMGVIYLRTLPPKMSGDKETEFSFRIDGTNAFKRVVMQSSRVSSLGNGQFHVRTAAAEEPIPVLKYSLLPQMTPIPLRVRLVKRHIGTLLSVMIQYVSNPELPEPLTDVTFILKLPVDPTLLKVSPKAVLNRSERELKWHVQEIPLKGTPGKLRARMPVDINEEDTEEEIDVVCHVKFSLKWTKSLSGVSLWPATEGKTDFHMVDNKVESGTYICN*

Click here to download the sequence:
Link to NCBI Protein BLAST