Transcript Information: S_Transcript_82729.p1


Annotated TAIR IDAT3G62470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23106600-23108399 | Reverse length=599
E-Value2E-233
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9546725343386
Replicate 23.923468057731
Replicate 33.7963732011309
Condition 2: 8 Hour
Replicate 15.1690044739458
Replicate 25.1229080928972
Replicate 34.6214626963297
Condition 3: 24 Hour
Replicate 13.8048944447685
Replicate 23.9475335632371
Replicate 33.8708618697255


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82729.p1 GENE.S_Transcript_82729~~S_Transcript_82729.p1 ORF type:complete len:821 (+),score=147.08,PPR_2|PF13041.2|0.0051,PPR_2|PF13041.2|13,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|4.3e-14,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|6.3e-09,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|0.0029,PPR_2|PF13041.2|1.6e+04,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.0011,PPR|PF01535.16|9,PPR|PF01535.16|3.3,PPR|PF01535.16|0.007,PPR|PF01535.16|0.0065,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|7.4e-05,PPR|PF01535.16|0.04,PPR|PF01535.16|1e-05,PPR|PF01535.16|0.00021,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|8.3,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.43,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|6.1e+03,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|5.1e-05,PPR_1|PF12854.3|7e-07,PPR_1|PF12854.3|0.0098,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|0.00013 S_Transcript_82729:54-2516(+)
ATGTCCAAGTTTGTTCTCTCACTAACCAAACCCACCAAAAAACCTTCAACCCTCAACTTTCTCTCCTCTAATCATCACCATGTCAGCTCCAATCAGACCTCCATATGCTCCACCCACTGTCAGGGACGATTACAATGTCAAAGAGGATTTCCCTTCACAAGACAAAAGCAGCTATTCCTTGACGGTATTCATTTGCCCTTGTGTCTTTTGTTTCCTTCTCATCTTAATTATTGTCTTTATTCTTCTCATTCTCAAGTTCCACTTGATTTGTCACCTCCCTTTACACTCTCTCCTTTCCAAGAAAAAATGCTAGCTTTTCACTTCACTAGTGGTTCTTTTTCTACCAAAAGATTGGATTTCGGGTATAAGTTGATTGCTAGATCAATCCCATATAGTGTTAGTTCTCATGTTTCTGTTAATAGGGTTTCAACTTTGGGATTGCCCACCAAAATTGAGTCTTTCTATCAATTAACCAGGTTGGATTTTACTAGTTCTTCCAAAAGATTAGATTTTGGGTCTAAATTGATTGCTAGATTAACGCCATATAGTGCTAGTTCTGATGTTTTTGTAAATAGGTTTTCAAGTTTGTGTATTCCCACCAAAATTGAATCTTGTTGTCAATTACCCAAGTTGGGTTTTGCTGGTTCTTCCAAAACATCAGATTTTGGGACTTTGAATTCACTATCTAGTGCTAGTAGTTCTGCTGCTTCTGTTAATGGGATTTCAAAAACGGGTTTGCTCACCAAAATTGAATCTTGCCATCAATTACCTAAGTTAGGTTTTGTTAATTCTTCCAAAAGATTAGATTTTGGGCCTTTGAATTCACTTTCTAGTAGGAGTATTTGTAGTTTTAATGTTTGTGTACATGGGTTTTCTATTTTGGGATTGCCCAAGTTGGGTTTTGTCGAAAAGATGATATCTTTGAAGTCTGGAGGTCATTATAGGGTGTTTTCAAGTTGTTGTGAGGATGATGAGAGATTGAGTGATGATGATTATGATGAGGGCAATAGAGGGAAAAATCTAGTTATTCCTCATGAGTTGAGTGCTGATCCTGAGGAAGTTGGTAGGGTAGCTAAGTTGATTGATCAGTTGTTCGCGTTAGATCGAAATATGGAGGCTGTTCTTGATGAGTGTGGCATTAACTTGACCCATAATTTGGTTGTTGATGTATTGCAACGCTTTAAGCATGCTAGGAAGCCTGCATTTCGATTCTTTTGTTGGGCGGCGCAAAGACCGGGGTTTTCACATGATTCTAGGACTTACAATGTGATGTTGACAATCTTGGGGAAGGCCAGGCAGTTTGAGACAATGGGGTCATTGCTTGAAGAAATGGGGAGAAAAGGGGTTATAACCATTGAGAGTTGCATGATCGCAATCAAAGTGTATGCTTGTGGCAAGGAGAGAAAGAAAGCTGTTGGGGTTTTGGATTTAATGAAGAAACATGGGTTCAAAGTAGGGGTTGATACAATCAATTGCTTGCTTGACACCCTTGCGAGGGAGAAGCTCGCAAAAGAGGCTCAAGCTTTGTATGATAAGTTGAAGAGTCGGTTTACTCCAAATCTCAAGACTTACTCAATTTTGCTTAGTGGTTGGTGTAAAGTGAAGAATCTTATGGAGTCTGGAAGGATATGGAATGAGATGATTGATCAAGGGTTCAAGCCTGATGTTATAACCCACAATATCATGCTTGATGGGCTCTTGAAGGTGAAAAAACGCTCGGATGCAATCAAACTTTTCGAGGTCATGAAGGCAAAGGGGCCAGCTCCAAGTGTTCGGAGCTACACCATATTGATAAGGAACCTGTGCAAGCATTCTAAGATGACGGAAGCTGTTGCATATTTTGATGAGATGTTGGGTTCAGGCTGTGACCCTGATGCTGGGGTGTATACTTGTTTGATTACAGGATTTGGCAACCTAAAAAAGATGGATTTGGTGTATAGTTTGCTTCGAGAGATGAAGGAGAAAGGCCATCATCCTGATGGGAAGTTGTATAACGCGTTGATCAAACTGATGACAAACAGGCGAATGCCCGATGATGCAGTTTGTATTTACAAGACCATGATTCAGGATGGAATTCAGCCTACAATACACACTTATAACATGATGATGAAATCCTACTTGTTGGCCGGAAATAGTGAAATGTGTTTTGCCGTTTGGGATGAGATGGTTCAGAGGGGTTGCTGCCCTGACGAGAACTCCTACACTATTCTCATCGGAGGGCTTATAAGACAAGGGAGATCAGAGGAGGTGTGTAAATATGTAGAGGAAATGATCAATAAAGGCATGAGAGTTCCACAACTCGATTTCAACAAGTTTGTCTCTGATTTCTCTAGGATCGGTCGGCCCAACATACTCGAGGAGCTAGCTCGAAAGATGAGGCTGTCTGGTAAATCTGAAGTTTCTGAAATCTTTGCTAGGTGGTCTGAGATGACCCAGAAAAGAAATGTTCAGAAGAGATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82729.p1 GENE.S_Transcript_82729~~S_Transcript_82729.p1 ORF type:complete len:821 (+),score=147.08,PPR_2|PF13041.2|0.0051,PPR_2|PF13041.2|13,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|4.3e-14,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|6.3e-09,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|0.0029,PPR_2|PF13041.2|1.6e+04,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.0011,PPR|PF01535.16|9,PPR|PF01535.16|3.3,PPR|PF01535.16|0.007,PPR|PF01535.16|0.0065,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|7.4e-05,PPR|PF01535.16|0.04,PPR|PF01535.16|1e-05,PPR|PF01535.16|0.00021,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|8.3,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.43,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|6.1e+03,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|5.1e-05,PPR_1|PF12854.3|7e-07,PPR_1|PF12854.3|0.0098,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|0.00013 S_Transcript_82729:54-2516(+)
MSKFVLSLTKPTKKPSTLNFLSSNHHHVSSNQTSICSTHCQGRLQCQRGFPFTRQKQLFLDGIHLPLCLLFPSHLNYCLYSSHSQVPLDLSPPFTLSPFQEKMLAFHFTSGSFSTKRLDFGYKLIARSIPYSVSSHVSVNRVSTLGLPTKIESFYQLTRLDFTSSSKRLDFGSKLIARLTPYSASSDVFVNRFSSLCIPTKIESCCQLPKLGFAGSSKTSDFGTLNSLSSASSSAASVNGISKTGLLTKIESCHQLPKLGFVNSSKRLDFGPLNSLSSRSICSFNVCVHGFSILGLPKLGFVEKMISLKSGGHYRVFSSCCEDDERLSDDDYDEGNRGKNLVIPHELSADPEEVGRVAKLIDQLFALDRNMEAVLDECGINLTHNLVVDVLQRFKHARKPAFRFFCWAAQRPGFSHDSRTYNVMLTILGKARQFETMGSLLEEMGRKGVITIESCMIAIKVYACGKERKKAVGVLDLMKKHGFKVGVDTINCLLDTLAREKLAKEAQALYDKLKSRFTPNLKTYSILLSGWCKVKNLMESGRIWNEMIDQGFKPDVITHNIMLDGLLKVKKRSDAIKLFEVMKAKGPAPSVRSYTILIRNLCKHSKMTEAVAYFDEMLGSGCDPDAGVYTCLITGFGNLKKMDLVYSLLREMKEKGHHPDGKLYNALIKLMTNRRMPDDAVCIYKTMIQDGIQPTIHTYNMMMKSYLLAGNSEMCFAVWDEMVQRGCCPDENSYTILIGGLIRQGRSEEVCKYVEEMINKGMRVPQLDFNKFVSDFSRIGRPNILEELARKMRLSGKSEVSEIFARWSEMTQKRNVQKRS*

Click here to download the sequence:
Link to NCBI Protein BLAST