Transcript Information: S_Transcript_82899.p1


Annotated TAIR IDAT4G34870.1
Annotated Gene Namerotamase cyclophilin 5
Annotated Gene Symbol(s)ROC5, ATCYP1
Annotation TypeOrtholog
Chromosome Positionchr4:16614451-16614969 | Forward length=172
E-Value3.8E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11508.0187925345
Replicate 21623.7192869727
Replicate 31333.3138739745
Condition 2: 8 Hour
Replicate 12492.2354996058
Replicate 22361.3292263665
Replicate 32596.9602310416
Condition 3: 24 Hour
Replicate 11626.1179745195
Replicate 21785.4629362661
Replicate 31558.6640273705


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82899.p1 GENE.S_Transcript_82899~~S_Transcript_82899.p1 ORF type:complete len:173 (+),score=29.09,Pro_isomerase|PF00160.17|1.5e-49 S_Transcript_82899:92-610(+)
ATGTCGAACCCCAAGGTTTTCTTCGACCTCTCAGTCGGAGGAGCCCCAGCCGGCCGTGTGGTAATGGAGCTCTTCGCTGACGTGGTCCCCAAAACCGCCGAGAATTTCCGCGCTTTATGCACCGGAGAGAAAGGCGTTGGTAAGAAGGGAAAGCCACTCCACTACAAAGGCTCATCCTTCCACCGTGTAATTCCTGGATTCATGTGCCAGGGTGGTGACTTCACCGCCGGAAACGGCACCGGAGGCGAGTCCATCTACGGCGACCGTTTCGCCGATGAGAACTTCGTCAAGAAGCACACTGGTGCTGGAATTCTATCAATGGCTAATGCTGGCCCTAACACCAATGGATCTCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGCTTGATGGTAAACACTGTGTTTTTGGTCAAGTTGTTGAGGGTATGGATGTCATTAGGGCTGTTGAGAAGGTTGGGTCTAGCAGTGGTAGGACTTCTAAGACTGTTACTATTGCTGATTGTGGTCAGCTCTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82899.p1 GENE.S_Transcript_82899~~S_Transcript_82899.p1 ORF type:complete len:173 (+),score=29.09,Pro_isomerase|PF00160.17|1.5e-49 S_Transcript_82899:92-610(+)
MSNPKVFFDLSVGGAPAGRVVMELFADVVPKTAENFRALCTGEKGVGKKGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGDRFADENFVKKHTGAGILSMANAGPNTNGSQFFICTAKTEWLDGKHCVFGQVVEGMDVIRAVEKVGSSSGRTSKTVTIADCGQLS*

Click here to download the sequence:
Link to NCBI Protein BLAST