Transcript Information: S_Transcript_8290.p1


Annotated TAIR IDAT5G12840.1
Annotated Gene Namenuclear factor Y, subunit A1
Annotated Gene Symbol(s)HAP2A, EMB2220, ATHAP2A, NF-YA1
Annotation TypeHomolog
Chromosome Positionchr5:4051147-4052961 | Reverse length=272
E-Value8E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8785647930716
Replicate 22.0764978407073
Replicate 34.1224939480989
Condition 2: 8 Hour
Replicate 12.8851998664356
Replicate 23.0267795218454
Replicate 32.8839087936151
Condition 3: 24 Hour
Replicate 14.882973956721
Replicate 23.1995969284255
Replicate 33.709124177223


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8290.p1 GENE.S_Transcript_8290~~S_Transcript_8290.p1 ORF type:3prime_partial len:170 (+),score=34.73 S_Transcript_8290:352-858(+)
ATGCCATCAAAATCTATACTGGCAAACCAACCAGAGCAAAATGCCCACACTATTCCTCCAACAACTGTCTGTTCGGAACAATGGTGGCGAGCTGCTGGATATGATCCCTATCCCTTAGCTAATGCAGGGGAAGTTGCCCCGAAAAATACATTTCCAGACCGTTCTGTTGAGGTTACAGGATCTAAAGATGACCAGTCACTGTCACATGGTGGAGATGATGATGATGAGACTAGCAAGGACTCTGAGACTACTGGTTCTACCTCTACACATCGAGATGGTAGTTCTGGGCATGACCTCCAAAAATCCCAATATGGTGATTCCAGTATGGCTCTTGGGAATGGGGAATGCTTTTCACAGCATCCGCCACTAGAACTTGTTGGTCATTCAATTGCTTGCGCAACCACCCCTTATCCGGACCTGTACTATGGTGGAATGATGGCTGCCTATGGACATCAGCCCTTGGTATGTAAATCATTGTGTTTCCTTGGTTGGCAATCACACCTCTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8290.p1 GENE.S_Transcript_8290~~S_Transcript_8290.p1 ORF type:3prime_partial len:170 (+),score=34.73 S_Transcript_8290:352-858(+)
MPSKSILANQPEQNAHTIPPTTVCSEQWWRAAGYDPYPLANAGEVAPKNTFPDRSVEVTGSKDDQSLSHGGDDDDETSKDSETTGSTSTHRDGSSGHDLQKSQYGDSSMALGNGECFSQHPPLELVGHSIACATTPYPDLYYGGMMAAYGHQPLVCKSLCFLGWQSHLF

Click here to download the sequence:
Link to NCBI Protein BLAST