Transcript Information: S_Transcript_82965.p1


Annotated TAIR IDAT5G42890.1
Annotated Gene Namesterol carrier protein 2
Annotated Gene Symbol(s)ATSCP2, SCP2
Annotation TypeOrtholog
Chromosome Positionchr5:17194458-17195910 | Reverse length=123
E-Value2.2E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1103.91743339451
Replicate 298.231943982268
Replicate 393.238276867092
Condition 2: 8 Hour
Replicate 1127.27534538479
Replicate 2114.3450041586
Replicate 3108.60931874919
Condition 3: 24 Hour
Replicate 1121.53383592783
Replicate 2110.26124203413
Replicate 3118.50357371293


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82965.p1 GENE.S_Transcript_82965~~S_Transcript_82965.p1 ORF type:complete len:126 (+),score=35.82,SCP2|PF02036.13|2.6e-18 S_Transcript_82965:223-600(+)
ATGTGGGACTCAAATCAGCAACTAAAGTCAGATGCTTTGTTAGAGCAAATGAAAACCCATCTCACCACTGATGCTGGCAAGGAAATCACTAAGAAGATCAACCTTGTTTATCAGCTCCAAATTGCCCCCAAGAAAATTGGGTTTAATGAGGTGATCTATACTGTTGATCTTAAGAAGGGAGAAGTTAAGAAAGGGGCGTATGAAGGGGGGAAGCCAGATGCTACGTTTTCATTCAAGGATGAAGATTTTTACAAAATTGCAACTGGGAAGATGAACCCACAAATTGCTTTCATGAGGGGTGCTATGAAGGTTAAGGGGAGCTTAAGTGCTGCTCAGAAATTCACTCCTGATATTTTCCCTAAGCCTTCTAAAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82965.p1 GENE.S_Transcript_82965~~S_Transcript_82965.p1 ORF type:complete len:126 (+),score=35.82,SCP2|PF02036.13|2.6e-18 S_Transcript_82965:223-600(+)
MWDSNQQLKSDALLEQMKTHLTTDAGKEITKKINLVYQLQIAPKKIGFNEVIYTVDLKKGEVKKGAYEGGKPDATFSFKDEDFYKIATGKMNPQIAFMRGAMKVKGSLSAAQKFTPDIFPKPSKM*

Click here to download the sequence:
Link to NCBI Protein BLAST