Transcript Information: S_Transcript_83049.p1


Annotated TAIR IDAT1G01970.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:338538-339905 | Forward length=409
E-Value2.8E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.801364804499
Replicate 213.809472192479
Replicate 316.278307398973
Condition 2: 8 Hour
Replicate 113.295781249068
Replicate 213.401229625264
Replicate 313.394065609976
Condition 3: 24 Hour
Replicate 113.299207797452
Replicate 210.694659252408
Replicate 312.456853226977


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83049.p1 GENE.S_Transcript_83049~~S_Transcript_83049.p1 ORF type:complete len:409 (+),score=90.86,PPR|PF01535.16|0.13,PPR|PF01535.16|1e-06,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.95,PPR|PF01535.16|0.037,PPR|PF01535.16|2.4e+02,PPR_2|PF13041.2|2.2e-07,PPR_2|PF13041.2|6.6e-08,PPR_2|PF13041.2|7.3,PPR_2|PF13041.2|0.057,PPR_2|PF13041.2|0.00046,PPR_2|PF13041.2|5.9e+02,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|8.1e+03,PPR_1|PF12854.3|4,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|4e+03 S_Transcript_83049:451-1677(+)
ATGACTTGTTCTTCATCTCACTTGCTCTCTTATCCTCACCTCTTACCAACCCATAATAAATCCACACCTTTCACTTTCAGCCATTTCCTAAACAAACCCACAAATCCTTCGACCCCTAAACTTCGACCCAGATCAAATTTATCCATTTCCAATGTAGAAGTTGCAGGAAATGTCCAAATCCAAGAAGATAAAGAGAAACCCAGATTTAGATGGGTTGAGATGAAACCAGAAAAGCTCACAGAAGAGCAAAGAATGGCAATTTCTAGACTGCCCAAGAAAATGGAGAAAAGATGTAAGGCTTTGATGAGGCAAGTTATATGTTTCTCTCCTGAGAAGGGAGACTTGTCTGATATGTTGGGTTATTGGGTTAAGGTTATGAAACCCAGAAGAGCTGATTGGCTTGCTGTTCTTAAGGAATTGAGGAATATGGATCATCCCTGGTTTTTTGAGGTTTTTGAACTTGCACTTTTTGAAGAATCATTTGAAGCAAATGTTCGTGATTATACAAAATTAGTTCATCTGTATGCAAAACAGGACCGACTTCAAAATGCTGAAAAATTACTCTTGGTGATGACTAGAAGAGGCTTGAGATGCGACCAGGTTACTTTAACTACAATGATTCACATGTACAGCAAAGCCGGCAACTTTAAGCTGGCTGAAGAAACATTTGAGGAGATGAAGCTTCTTGGTCAGCCATTAGATAAAAGATCATATGGTTCAATGATCATGGCGTGCATTAGGGCTGGCATGCCAAATAGAGGAGAGGATATAATCAAAGAAATGGAACAGCAAGAGATCTATGCAGGCAGAGAAGTTTACAAAGCATTACTGAGAACATACTCCATGAAAGGTGATGCTGAAGGAGCTCAGAGGGTTTTCAATGCAATCCAAGTTGCTGGCATTTGTCCTGACATTAAGCTCTGTGGGCTCCTCATAAATGCCTACGTGCTGGCTGGTCAAAGTCAAAAAGCTCGGATTGCCTTTGAAAATATGAGAAAAGCTGGTATAGAACCTAGTGATAAATGTGTAGCACTTGTGTTGGCCGCTTATGAAAAGGACAACAGGGTTAACACTGCCCTTGACTTCCTGTTAAACCTTGAGCAAGAAGGTATCATGGTTGGTAAAGAAGCTTCTGAAGTATTGGTTGGGTGGTTTCGGAGATTAGGAGTTGTGGACGAGGTGGCAAATGTCTTGGGTGAATATGCTGCCAATAGAGTTGCAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83049.p1 GENE.S_Transcript_83049~~S_Transcript_83049.p1 ORF type:complete len:409 (+),score=90.86,PPR|PF01535.16|0.13,PPR|PF01535.16|1e-06,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.95,PPR|PF01535.16|0.037,PPR|PF01535.16|2.4e+02,PPR_2|PF13041.2|2.2e-07,PPR_2|PF13041.2|6.6e-08,PPR_2|PF13041.2|7.3,PPR_2|PF13041.2|0.057,PPR_2|PF13041.2|0.00046,PPR_2|PF13041.2|5.9e+02,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|8.1e+03,PPR_1|PF12854.3|4,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|4e+03 S_Transcript_83049:451-1677(+)
MTCSSSHLLSYPHLLPTHNKSTPFTFSHFLNKPTNPSTPKLRPRSNLSISNVEVAGNVQIQEDKEKPRFRWVEMKPEKLTEEQRMAISRLPKKMEKRCKALMRQVICFSPEKGDLSDMLGYWVKVMKPRRADWLAVLKELRNMDHPWFFEVFELALFEESFEANVRDYTKLVHLYAKQDRLQNAEKLLLVMTRRGLRCDQVTLTTMIHMYSKAGNFKLAEETFEEMKLLGQPLDKRSYGSMIMACIRAGMPNRGEDIIKEMEQQEIYAGREVYKALLRTYSMKGDAEGAQRVFNAIQVAGICPDIKLCGLLINAYVLAGQSQKARIAFENMRKAGIEPSDKCVALVLAAYEKDNRVNTALDFLLNLEQEGIMVGKEASEVLVGWFRRLGVVDEVANVLGEYAANRVAA*

Click here to download the sequence:
Link to NCBI Protein BLAST