Transcript Information: S_Transcript_83126.p1


Annotated TAIR IDAT1G56345.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21093409-21094454 | Reverse length=322
E-Value2.6E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9570001372423
Replicate 23.5874454565065
Replicate 34.4982283130733
Condition 2: 8 Hour
Replicate 15.0857299401293
Replicate 25.2140351843265
Replicate 34.4480223999555
Condition 3: 24 Hour
Replicate 14.0848156120623
Replicate 23.6237530704729
Replicate 33.8960881601399


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83126.p1 GENE.S_Transcript_83126~~S_Transcript_83126.p1 ORF type:complete len:369 (+),score=74.34,PseudoU_synth_2|PF00849.18|4.6e-22 S_Transcript_83126:128-1234(+)
ATGGCTCTTCTTGCAAACCATAAGATCCTACAGCCGAGGCCATTCATGTTTTCCTCTTCAGCTCGCTCCTTCCCTTTCCCACCTCGTATCACACCCCCTCTACTCAAACCCTCAACCTTGTTTCTCAATTGTCAAACAACCCCACTTTCATCAATGTCATCCAAAACCCAAAACCCATCAGATGAGCAAACCCATTTGCCAGATGACCCTAAAACCCCACCTGTCCCATCATATCCAACCCCTTTGTCCCCTCCATTGCCTCCAATCTCCAAGCAAATTGAGCTAAGTAGGGCTTTAACGGCCTCTTCGAAATCTAGCCTTTACTCCCTCTCAAGGGATGATGTGATATTCGAGGATGAATGGCTGTTGGTTGTCAATAAACCATCTGGGGTTTATTGTGAGAATGTCCTTTCTTCTGCTTCAAACCTCGTCCAACAATCTCTTGATTCAGCAGCAGCCTTGGAGGTCCATCTTGCCAACAGGTTGGATCGTGACACAAGTGGTGTAATGGTTATAACCAAATTACACAAAGTAGCTGGCAAGCTTGTTAAGGCATTTACTGATCACAAGGTCCAGAAAACCTATATTGCTCTTTCTATTGGTTCAGCACCAAAATGGGACAGAATCAGAGTAAAATCTGGCCATGGTAGATCTAAATTTGGAGCCTGGCGTGTATATGCTGCATCAGATGTTGGTCGAATCCTACCTGGTGGATCTGTAGTGAGGGACATGGAAACTTTATTTGAGGTGTTATCAGTAAATGGACGGGATTACTCTAACAATTCAACTGAAACTACAAAAGATGAAAAAACAGTTGTGGTTGAGGAGAAGTCCTCAACAGATGTTAGCCAAATGAAGGATGAGATTTTGGTGCGAGCTTTTCCAAAGAGTGGAAGAACACATCAAATACGCTTGAATTGTCAATACCTGGGAATTCCTATAAAGGGAGACGTGAAATATGAAGGTGTTTGTGAGTGGAAAGGGGAAGCTTGTGATGTTCATGCACTTCATGCTGAGAGTTTGTCACTTGAACATCCTGTTACTGGTGTTCAACTGCTACTTAAGGCACCGTTACCATTATGGGCTAGCCAGGCTATGCAATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83126.p1 GENE.S_Transcript_83126~~S_Transcript_83126.p1 ORF type:complete len:369 (+),score=74.34,PseudoU_synth_2|PF00849.18|4.6e-22 S_Transcript_83126:128-1234(+)
MALLANHKILQPRPFMFSSSARSFPFPPRITPPLLKPSTLFLNCQTTPLSSMSSKTQNPSDEQTHLPDDPKTPPVPSYPTPLSPPLPPISKQIELSRALTASSKSSLYSLSRDDVIFEDEWLLVVNKPSGVYCENVLSSASNLVQQSLDSAAALEVHLANRLDRDTSGVMVITKLHKVAGKLVKAFTDHKVQKTYIALSIGSAPKWDRIRVKSGHGRSKFGAWRVYAASDVGRILPGGSVVRDMETLFEVLSVNGRDYSNNSTETTKDEKTVVVEEKSSTDVSQMKDEILVRAFPKSGRTHQIRLNCQYLGIPIKGDVKYEGVCEWKGEACDVHALHAESLSLEHPVTGVQLLLKAPLPLWASQAMQL*

Click here to download the sequence:
Link to NCBI Protein BLAST