Transcript Information: S_Transcript_8315.p1


Annotated TAIR IDAT1G67680.1
Annotated Gene NameSRP72 RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25365962-25368464 | Reverse length=664
E-Value1E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.336008709936
Replicate 225.768648741004
Replicate 319.451323213173
Condition 2: 8 Hour
Replicate 124.574180248259
Replicate 222.983578875969
Replicate 325.895424238864
Condition 3: 24 Hour
Replicate 125.087483383729
Replicate 217.529041766081
Replicate 320.689958301072


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8315.p1 GENE.S_Transcript_8315~~S_Transcript_8315.p1 ORF type:complete len:256 (+),score=60.34,SRP_TPR_like|PF17004.1|5.4e-16,SRP_TPR_like|PF17004.1|1.2e+03,ANAPC3|PF12895.3|9.9e-06,ANAPC3|PF12895.3|0.13,TPR_16|PF13432.2|0.44,TPR_16|PF13432.2|0.075,TPR_16|PF13432.2|1.8,TPR_16|PF13432.2|40,TPR_2|PF07719.13|7.8,TPR_2|PF07719.13|1.5e+03,TPR_2|PF07719.13|0.015,TPR_2|PF07719.13|8.4,TPR_2|PF07719.13|18,TPR_19|PF14559.2|0.00082,TPR_19|PF14559.2|0.23,TPR_19|PF14559.2|4.4e+02,TPR_19|PF14559.2|95,TPR_19|PF14559.2|67 S_Transcript_8315:162-929(+)
ATGGCGCCAAAAGCGAAGGGGAAACCTGCTCAATCGCAACCAGCAATGTCAATAGAAGATCTCTTCACTTCCCTCGATCGGCATATTAAAGAAACTCAATACCAAAGGGCTGTCAAAGTTGCTGATCAAATTTTGGCAATCGCACCGGGTGATGAGGATGCACTTCGGTGCAAGATTGTTGCTCTGATTAAAGCTGATAATATTGATGAAGCTTTCAAGACTATCCAATCTTCTCATAAGCTCCCCATTGATCTCAATTATTACAAGGCATATTGTTTATACAGGCAAAACAAATTGGATGAAGCTTTGGAATCTTTGGAAAGCCAAGAAAGAAGCGATCTGACTATGCTGCTGGAATCCCAGATTTTGTATCGTTTGGGAAAATTTGATGCTTGTTTGAAAATTTATCAATCACTTCAGAGTGACAAAATTGAATCCTTGGAGGTCAACTTTGTTGCTGCTTTGGTAGCCGCTGGGCGATCATCTGAGGTGCAAAAAACATTGGATGCACTCAAAGTTAAACCAACAAGCCAGTATGAGTTAGCTTACAACACTGCTTGCTCATTGATTGAGAGGCAAAGTTATGCTGAAGCAGAGCAGCTCTTGCTGGCTGCTCGAAGAGTGGGCCAGGAAGCTTTTATGGAAGATAACTGGGCAGATGACGAGATAGAGAGTGAATTGATTCCTATCACTGTCCAACGGGCATATGTCCAACAGGTAATAGCTCATGTGAATTTGAAATCTTTCAGTTTAGAGATGAACATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8315.p1 GENE.S_Transcript_8315~~S_Transcript_8315.p1 ORF type:complete len:256 (+),score=60.34,SRP_TPR_like|PF17004.1|5.4e-16,SRP_TPR_like|PF17004.1|1.2e+03,ANAPC3|PF12895.3|9.9e-06,ANAPC3|PF12895.3|0.13,TPR_16|PF13432.2|0.44,TPR_16|PF13432.2|0.075,TPR_16|PF13432.2|1.8,TPR_16|PF13432.2|40,TPR_2|PF07719.13|7.8,TPR_2|PF07719.13|1.5e+03,TPR_2|PF07719.13|0.015,TPR_2|PF07719.13|8.4,TPR_2|PF07719.13|18,TPR_19|PF14559.2|0.00082,TPR_19|PF14559.2|0.23,TPR_19|PF14559.2|4.4e+02,TPR_19|PF14559.2|95,TPR_19|PF14559.2|67 S_Transcript_8315:162-929(+)
MAPKAKGKPAQSQPAMSIEDLFTSLDRHIKETQYQRAVKVADQILAIAPGDEDALRCKIVALIKADNIDEAFKTIQSSHKLPIDLNYYKAYCLYRQNKLDEALESLESQERSDLTMLLESQILYRLGKFDACLKIYQSLQSDKIESLEVNFVAALVAAGRSSEVQKTLDALKVKPTSQYELAYNTACSLIERQSYAEAEQLLLAARRVGQEAFMEDNWADDEIESELIPITVQRAYVQQVIAHVNLKSFSLEMNM*

Click here to download the sequence:
Link to NCBI Protein BLAST