Transcript Information: S_Transcript_83166.p1


Annotated TAIR IDAT5G46250.1
Annotated Gene NameRNA-binding protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18755388-18758056 | Forward length=422
E-Value2.8E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 164.604024737576
Replicate 265.655451050382
Replicate 361.876715990631
Condition 2: 8 Hour
Replicate 190.658664150131
Replicate 278.733776492951
Replicate 376.870919019897
Condition 3: 24 Hour
Replicate 171.444377406436
Replicate 256.112093878638
Replicate 365.552946328273


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83166.p1 GENE.S_Transcript_83166~~S_Transcript_83166.p1 ORF type:complete len:414 (+),score=113.05,La|PF05383.13|9.2e-25,RRM_1|PF00076.18|7.4e-05 S_Transcript_83166:179-1243(+)
ATGGAGAGCGAAGGGATCGTAGCCGTTGATTCACCACCTCCGGCGATCGTAGACGTCGATTCTGCTTCCCCAGATGACGACGCTACGCTTGAGTCTCCTCCTTCTGATGTAGAGGATCACCGCCCCCAAGTTACTCCTGCCCCTCCTTCTCTAAAGGAGCTTCGCGCTAAGATCATCAAGCAGGTAGAATATTACTTCAGTGATGGAAACTTGCCTAATGACAAGTTCTTGTTGAAACATGTGAAGAAGGACAGAGAAGGTTTTGTATCGATTTCGTTACTTGCTTCCTTCAGGAAGATGAAAAAACTTTCCAAAGACATCTCATTTATTGTGGATGCTCTGAAGGAGTCATCGCAGCTTGTTGTAAGCTTGGATGGGAAGAAGGTAAAACGAGTCCATCCTCTACCAGTAAATGAGGTTAAGGATCCCAAGTTTTGTACTGTTATTGTAGAGAACTTACCTGAAGATCACTCAGTAGAGAATATCCAGAGAATTTGTGGTCGTGTTGGAAGTATAAAGAGTGTATCTGTACATGATCCTCATGCTGCTAAAGATGCAGTACAGACAAAGAAGGCCGAGAAACGGATTAGTGGCAAGATATATGCACTAATTGCTTATGAGACAGTGGAGGCTGCTGAGAAAGCTGTGGCCACTTTAAATGATGAAACAGACTGGCGAAATGGCCTTCGTGTTCAACTTCTTCGAAAGCGAATGGGTTATAATGTGGGACGGAAAGCATGGAGAGGAACTGAATCTGAGAAGGGTAATGCTAAATTGCCTGTTTCTGTTGGAGATGAGGAAAACAGGCATTCAAATGAGCAGCATGGTGATGTCCCTGACAATGAGGATGGAGAACATGTGTCCAAAGAACGAAATGGAAATGGAAATGGGCGGAAAGTTCGAAATAGATCAAAGGGACGAAAGTACCGAGGCAACAGTGGAATGGGACATGGTTCTGCAGCAGTTGTTGAGGCCTCTAAGCCACCTCCTGGTCCTCGAATGCCTGATGGAACAAGAGGATTTACTATGGGACGTGGACGCTCTCCGGTTTCAGCCACTGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83166.p1 GENE.S_Transcript_83166~~S_Transcript_83166.p1 ORF type:complete len:414 (+),score=113.05,La|PF05383.13|9.2e-25,RRM_1|PF00076.18|7.4e-05 S_Transcript_83166:179-1243(+)
MESEGIVAVDSPPPAIVDVDSASPDDDATLESPPSDVEDHRPQVTPAPPSLKELRAKIIKQVEYYFSDGNLPNDKFLLKHVKKDREGFVSISLLASFRKMKKLSKDISFIVDALKESSQLVVSLDGKKVKRVHPLPVNEVKDPKFCTVIVENLPEDHSVENIQRICGRVGSIKSVSVHDPHAAKDAVQTKKAEKRISGKIYALIAYETVEAAEKAVATLNDETDWRNGLRVQLLRKRMGYNVGRKAWRGTESEKGNAKLPVSVGDEENRHSNEQHGDVPDNEDGEHVSKERNGNGNGRKVRNRSKGRKYRGNSGMGHGSAAVVEASKPPPGPRMPDGTRGFTMGRGRSPVSATV*

Click here to download the sequence:
Link to NCBI Protein BLAST