Transcript Information: S_Transcript_83168.p1


Annotated TAIR IDAT5G46250.1
Annotated Gene NameRNA-binding protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18755388-18758056 | Forward length=422
E-Value1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.405242680484
Replicate 230.693233707954
Replicate 327.121670711177
Condition 2: 8 Hour
Replicate 140.831850283687
Replicate 240.532525770799
Replicate 335.798085242483
Condition 3: 24 Hour
Replicate 131.932079690663
Replicate 228.329764470434
Replicate 331.972650407662


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83168.p1 GENE.S_Transcript_83168~~S_Transcript_83168.p1 ORF type:3prime_partial len:340 (+),score=97.80,La|PF05383.13|1.1e-25 S_Transcript_83168:144-1019(+)
ATGGAGAGCGAAGGGATCGTAGCCGTTGATTCACCACCTCCGGCGATCGTAGACGTCGATTCTGCTTCCCCAGATGACGACGCTACGCTTGAGTCTCCTCCTTCTGATGTAGAGGATCACCGCCCCCAAGTTACTCCTGCCCCTCCTTCTCTAAAGGAGCTTCGCGCTAAGATCATCAAGCAGGTAGAATATTACTTCAGTGATGAAAACTTGCCTAATGACAAATTCTTGTTGAAACATGTGAAGAAGGACAGAGAAGGTTTTGTATCGATTTCGTTACTTGCTTCCTTCAGGAAGATGAAAAAACTTTCCAAAGACATCTCATTTATTGTGGATGCTCTGAAGGAGTCATCGCAGCTTGTTGTAAGCTTGGATGGGAAGAAGGTAAAACGAGTCCATCCTCTACCAGTAAATGAGGTTAAGGATCCCAAGATATATGCACTAATTGCTTATGAGACAGTGGAGGCTGCTGAGAAAGCTGTGGCCACTTTAAATGATGAAACAGACTGGCGAAATGGCCTTCGTGTTCAACTTCTTCGAAAGCGAATGGGTTATAATGTGGGACGGAAAGCATGGAGAGGAACTGAATCTGAGAAGGGTAATGCTAAATTGCCTGTTTCTGTTGGAGATGAGGAAAACAGGCATTCAAATGAGCAGCATGGTGATGTCCCTGACAATGAGGATGGAGAACATGTGTCCAAAGAACGAAATGGAAATGGAAATGGGCGGAAAGGTCGAAATAGATCGAAAGGACGAAAGTACAGAGGCAACAGTGGAATGGGACATGGTTCTGCAGCAGTTGTTGAGGCCTCTAAGCCACCTCCTGGTCCTCGAATGCCTGATGGAACAAGAGGATTTACTATGGGACGTGGACGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83168.p1 GENE.S_Transcript_83168~~S_Transcript_83168.p1 ORF type:3prime_partial len:340 (+),score=97.80,La|PF05383.13|1.1e-25 S_Transcript_83168:144-1019(+)
MESEGIVAVDSPPPAIVDVDSASPDDDATLESPPSDVEDHRPQVTPAPPSLKELRAKIIKQVEYYFSDENLPNDKFLLKHVKKDREGFVSISLLASFRKMKKLSKDISFIVDALKESSQLVVSLDGKKVKRVHPLPVNEVKDPKIYALIAYETVEAAEKAVATLNDETDWRNGLRVQLLRKRMGYNVGRKAWRGTESEKGNAKLPVSVGDEENRHSNEQHGDVPDNEDGEHVSKERNGNGNGRKGRNRSKGRKYRGNSGMGHGSAAVVEASKPPPGPRMPDGTRGFTMGRGR

Click here to download the sequence:
Link to NCBI Protein BLAST