Transcript Information: S_Transcript_83212.p1


Annotated TAIR IDAT5G24830.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8531226-8533266 | Forward length=593
E-Value2.2E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0299486870616
Replicate 25.7241945415545
Replicate 36.2109557944772
Condition 2: 8 Hour
Replicate 15.459593053699
Replicate 28.0338769170152
Replicate 37.1052825349938
Condition 3: 24 Hour
Replicate 15.0295779858069
Replicate 25.7243647795929
Replicate 36.2405058321937


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83212.p1 GENE.S_Transcript_83212~~S_Transcript_83212.p1 ORF type:complete len:582 (+),score=88.53,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|6.1e-07,PPR_1|PF12854.3|3.1e-10,PPR_1|PF12854.3|5.2e-08,PPR_1|PF12854.3|0.76,PPR_1|PF12854.3|7.7e-06,PPR_1|PF12854.3|8.5e-06,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|7.5e+02,PPR_1|PF12854.3|9.3e-05,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|9.2e-10,PPR_1|PF12854.3|2.3e-09,PPR_1|PF12854.3|2.9e+03,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|9.2e-06,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|0.0061,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|7.2e-11,PPR_2|PF13041.2|5.3e-10,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|4.1e-10,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|3e-17,PPR_2|PF13041.2|7.3e-05,PPR|PF01535.16|0.012,PPR|PF01535.16|9.3e-05,PPR|PF01535.16|9.9e-07,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.0049,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.1,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|8.2e-06,PPR|PF01535.16|0.00048,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|5.3e-05,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|75,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.6 S_Transcript_83212:130-1875(+)
ATGGCCTGTACATCTAATCTCTCACTCTTTGAAATTGCTGGTGCTAGACTTAGCTCTCTCTTCTCTTTCCGCCATTGGATTTTTGGATATGATGCAATGCTCATGTTTGTTAGAGATGTGGCAATGAGTGTACGTGATAGTTGTCAACCAATGATTAGAGGTTCTCATTCAGAAAACAATGATTTCAACGGAAAAGAAGAACATGATGCAGTTTTTAATCTGTTGGATTCCATCCTAAAGGAGAGTTTGGATCGTTTGAAGACTATGAGGGAAACTGCATCAGTGCCTGCAATTGTCTTGAAGAAGTTCTCTGGAGCTGAATTACTTGAATGTGAAGCCATGATCAGGGCTTTTTGTTTGGAAGGCAAGTTAGATGCTGCTCTTTGGCTTCGAAGCAAAATGATGGTGAAAAATTATATCCCTACTGTGTTTACACACAATCACCTAGTGCATGCATTTTGTAAAGTTGGTAATTTGGAGAAGGCCGATTATCTTATTAGGGAGATGTTAAATCAAGGTCCCTTCCCTAGCTGTGTAACTTTCAACACATATATCAAGGGCTATTGTTTAAAGGGTGATGTAGATAAAGCTTTGTCCTTGTTTTCATCCATGCCTATACATCGTATCAAGCCAAACAGAATTACTTGTAAAATTCTTCTTCATGCACTATGTAAGGAAGGATTAGTGGAAGATGCCAAAAAGCTTTTTGTGGAGATAGTTGGTGAAAAATGTGAGAAAACATCAGATACTATAACTTCAACGATACTAATGGATTGCTATTTCAAGAATGGTGATGTTGCTAAGGCTCTTCATTATTGGACAAATATGTTGCAGGATGGTACACAAGTGGATGTTGTTGCTTATAATGTTCTTATACATGGTTTCTGTAAAAACAAGTGTATAAAACTTGCATTATGTTGCTTTGGGGAAATGGTTAAGAGAGGAATACTACCCGACTTGGTCACTTGTAATACAATTATCAGTTACTTCTGTAGGATTGGGAAATTTCATGAGGTGTGGAACACCCTTGGTGTCATGTCGTGCTTTGAAGTGTCTCCTGATCACTTTACCTATAAACTGATTGTTCTAAGCCTTTGTTTACGTGGCTTCTATAAAAGAAGAAGGCTTTGTTTACGTCACCTCTCTAAAAAAAAAAGGCTTCATTTACATGAAAGACTTGCCGTGGCAAGAGAAGTACTGAACAATATGTTAGAGAATTCAGTTGTTCCAGAGCCTAGAATTTGGAATGTTATCATTCATGGTTATTGGAGATGTGGTGACTTGGACAGTGCATTTTCTGTTAGAGACCAGATGGTTTCTTGTGGTTTGTCACCGGATGTGGTTACCTACAACACAATCATGTATGTCTTGTTGCAGGAAGGTAATGTCAATGGAGCTCTCTCTCTGAAAAAAGAGATGGAGCGAATTCATCAGCTCCCAGACATAGTGACGTACAATATGTTGATTGCTGCAACTTGTAGGCTAGGGTTGCTTCATTTTGCATTCCAGTTAATTGATGAAATGCTTCGGAGACGGTGTCATCCAGATGCTATAACCTACACGGAACTAATCAAAGGTTATTGCCGAAAGGGGTACTTCAATGAAGCAGAAGAAATCTTTTTCAACTTGTGGATTTCTGGACTACAAGTTCAGGATGCTCCATGTCAGATTCTGGTTAAAAGATATTGCAGAAAGCATGGCCGTCAGAGGTCACTTCACCTCTTTGATACTCTTTTGAAGGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83212.p1 GENE.S_Transcript_83212~~S_Transcript_83212.p1 ORF type:complete len:582 (+),score=88.53,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|6.1e-07,PPR_1|PF12854.3|3.1e-10,PPR_1|PF12854.3|5.2e-08,PPR_1|PF12854.3|0.76,PPR_1|PF12854.3|7.7e-06,PPR_1|PF12854.3|8.5e-06,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|7.5e+02,PPR_1|PF12854.3|9.3e-05,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|9.2e-10,PPR_1|PF12854.3|2.3e-09,PPR_1|PF12854.3|2.9e+03,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|9.2e-06,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|0.0061,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|7.2e-11,PPR_2|PF13041.2|5.3e-10,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|4.1e-10,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|3e-17,PPR_2|PF13041.2|7.3e-05,PPR|PF01535.16|0.012,PPR|PF01535.16|9.3e-05,PPR|PF01535.16|9.9e-07,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.0049,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.1,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|8.2e-06,PPR|PF01535.16|0.00048,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|5.3e-05,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|75,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.6 S_Transcript_83212:130-1875(+)
MACTSNLSLFEIAGARLSSLFSFRHWIFGYDAMLMFVRDVAMSVRDSCQPMIRGSHSENNDFNGKEEHDAVFNLLDSILKESLDRLKTMRETASVPAIVLKKFSGAELLECEAMIRAFCLEGKLDAALWLRSKMMVKNYIPTVFTHNHLVHAFCKVGNLEKADYLIREMLNQGPFPSCVTFNTYIKGYCLKGDVDKALSLFSSMPIHRIKPNRITCKILLHALCKEGLVEDAKKLFVEIVGEKCEKTSDTITSTILMDCYFKNGDVAKALHYWTNMLQDGTQVDVVAYNVLIHGFCKNKCIKLALCCFGEMVKRGILPDLVTCNTIISYFCRIGKFHEVWNTLGVMSCFEVSPDHFTYKLIVLSLCLRGFYKRRRLCLRHLSKKKRLHLHERLAVAREVLNNMLENSVVPEPRIWNVIIHGYWRCGDLDSAFSVRDQMVSCGLSPDVVTYNTIMYVLLQEGNVNGALSLKKEMERIHQLPDIVTYNMLIAATCRLGLLHFAFQLIDEMLRRRCHPDAITYTELIKGYCRKGYFNEAEEIFFNLWISGLQVQDAPCQILVKRYCRKHGRQRSLHLFDTLLKG*

Click here to download the sequence:
Link to NCBI Protein BLAST