Transcript Information: S_Transcript_83253.p1


Annotated TAIR IDAT5G08200.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2638385-2640508 | Forward length=409
E-Value9E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.947984945744
Replicate 219.051595182211
Replicate 315.005900750436
Condition 2: 8 Hour
Replicate 112.929567357632
Replicate 213.094284111966
Replicate 313.315411364791
Condition 3: 24 Hour
Replicate 114.735262617015
Replicate 216.358394182403
Replicate 314.961107704872


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83253.p1 GENE.S_Transcript_83253~~S_Transcript_83253.p1 ORF type:complete len:381 (+),score=61.35 S_Transcript_83253:550-1692(+)
ATGGAATTTGAGAGAAGGAATGGATTTGCAAATGGAAATGGAAATTTATATATGTACGATCGATTCAAGTTGGAGGAGAGAGAAAGTGATAATAGTCCAACAACGGAGTCTGTGAAGGTATATCCGGTATCGTCGACGACGTCATCAGCTCCGTCATCGTCGTCATCATCTCCGCATCGATATATCGAGCATCATGTCACTAAGATGGATACCCTTGCCGGTGTCGCCATTCGTTACGGTGTCGAGGTCGCTGATATAAAAAAGATGAATGGCCTGGTTACGGATCTTCAAATGTTTGCCCTCAAGACACTTCATATTCCACTGCCTGGGAGGCACCCTCCATCTCCTTGCTTATCAAATGGCCACAGTGCTTCTGGACAAACCAGCTCTGAGCAGACTCCACCTCGCAAGTTGCACACTGATTTCCTTGATTCGTTTCAATCTTTGAGATTGACACCAGAACGCAGGGTTTCCCCTGCCATGAGCTCTTTGCAAGGGTACTATGGGCTTAAGGGCAGAAGAAACTCTTCTGAAGGCTGCGAAATGGCGGTTTACTGCAAAGGAAGTAACAACTCCCATGAAGATGACGCATATACGACACCATCATTGCTGATGAATCCCCCTCTCAGTCATCATAGGAGATCCAGAAGTTTGGCTAATGGTTTCAAGACTGAAGAATGCGATCCAACTGATGATGCGGACACAGATCTTGATAAACGGTTGGGTAAACAAAGCAGGCGGCGCCAAAAATCAGAAGTGGACTTTGGTCGCACTCCCGAGAAATTGTTGAAAGAGGAAAACGGTAGCAGTAGTTGGTTTTCTGCAATCACAGGGAAGGGTTTAGCACTTAGAACAAAAGCAGCAAGCCGAACTAATTTAGCTTCCGAAGGTGAAGGAGGGGGAGTGAATGGACTGTCATCCTTACCGGTGGACTCTGCTGCGGCTGATAACTCATCAGGATTTAGAAAGTCATCAAGCACATCAAGTTTACAGGAACAGGAAAACGGTAGTAGTTCATTCATCTGGTCAGCATCCAAGTGGTCTTCTTTGAAGCCGGACTTACAGGCCGCCCTTTCAAAACCAATCTTTGATGGCCTTCCGAAACCAATTACTGGTCGAAAAACTAAAGCCGCTCTGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83253.p1 GENE.S_Transcript_83253~~S_Transcript_83253.p1 ORF type:complete len:381 (+),score=61.35 S_Transcript_83253:550-1692(+)
MEFERRNGFANGNGNLYMYDRFKLEERESDNSPTTESVKVYPVSSTTSSAPSSSSSSPHRYIEHHVTKMDTLAGVAIRYGVEVADIKKMNGLVTDLQMFALKTLHIPLPGRHPPSPCLSNGHSASGQTSSEQTPPRKLHTDFLDSFQSLRLTPERRVSPAMSSLQGYYGLKGRRNSSEGCEMAVYCKGSNNSHEDDAYTTPSLLMNPPLSHHRRSRSLANGFKTEECDPTDDADTDLDKRLGKQSRRRQKSEVDFGRTPEKLLKEENGSSSWFSAITGKGLALRTKAASRTNLASEGEGGGVNGLSSLPVDSAAADNSSGFRKSSSTSSLQEQENGSSSFIWSASKWSSLKPDLQAALSKPIFDGLPKPITGRKTKAALD*

Click here to download the sequence:
Link to NCBI Protein BLAST