Transcript Information: S_Transcript_83471.p1


Annotated TAIR IDAT4G33440.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16092020-16094732 | Forward length=475
E-Value5.6E-241
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.18832296826
Replicate 28.3298287104903
Replicate 310.162323964433
Condition 2: 8 Hour
Replicate 113.273967442297
Replicate 211.185924319863
Replicate 313.659543159111
Condition 3: 24 Hour
Replicate 19.3175115296616
Replicate 28.1867237734969
Replicate 38.2357696016706


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83471.p1 GENE.S_Transcript_83471~~S_Transcript_83471.p1 ORF type:complete len:490 (+),score=67.35,Glyco_hydro_28|PF00295.13|1.2e-45,Pectate_lyase_3|PF12708.3|2.7e-14 S_Transcript_83471:269-1738(+)
ATGACGATGCAAATGAGAACGGAGGATGAAAAACCATTACTAGGCACAATCATAAATGGAGCCATAATATGGCGCCCAATATCATGGGCTTTTCTTTTATTATTCTTCATAACTCTTGCAGTTTTATCTCTCCCTTTTACAACCAAAACCTTTTCTTCTCCACCACCACCATGGCCTTTTTCGGGTCAACTACCCATCCGGGTTGACCCGAATAGCTGTTCTGGGTTCTTTCAGGGTGACCCAACAAGGAAGTTTGTCATGTCAATTACAGAATTTGGTGGCATTGGTGATGGTAAAACATCTAACACACAAGCCTTTCAAAAAGCTGTTGATTACTTGAAAAAATTTGATAAAATAGGTGGGTCCCAGTTGATTGTACCAAAGGGAAGATGGGCCACTGGAAGCTTCAATCTTACTAGCAATTTCACCCTTTTTCTTGAAGAGGGTGCCTACATTTTGGGCTCTCAGGACCCAAAAGAGTGGCCTATCATTGAGCCCTTGCCATCTTATGGAAGAGGAAGAGAGAGATTAGGTGGCAGACATATAAGTCTCATCCATGGAAACTCTATCAGCAATGTTGTCATTACAGGACATAATGGCACCATTGATGGACAGGGGAGAATGTGGTGGGATATGTGGTGGAACAGAACACTGGAGCGTACTAGAGGCCATCTTGTACAGTTTGTTAATTCGCAGAACATTATGATCTACAATCTCACATTTCGAAATTCTCCATTTTGGACCATCCATCCTGTGTACTGTAGGAATGTTTTGGTAAAGAATATGACAATTTTGGCTCCTCTAAATGCCCCAAACACAGATGGTGTAGACCCAGATTCAAGCACAGATGTATGCATAGAAGATTGTTATGTCGAGAGCGGGGATGATCTTGTCGCCATAAAGAGTGGGTGGGATCAGTATGGCATTGAAATGGCACGACCCAGCTCAAATATAATAGTGAAAAGAATATCTGGTACAACCCCAACGTGCTCTGGGGTCGGTATAGGCAGTGAGATGTCTGGTGGAATATTTAACATATCTGTAGAGGATATTCATGTTTGGAATTCAGCAGCTGGAGTTCGAATAAAAACAGATGCTGGGAGAGGAGGTTACATAGCAAATATTTCCATCAGCAACCTGAAGCTGGAGAGAGTAAAAGTACCCATTAAGTTCAGTAGGGGCGCCAATGATCACCCTGACGATAAATGGGACCCTAAAGCTGTTCCTAGAGTCAGTCGGGTTTTCATTAGTAATGTGGTAAGCTTGAAGTCGAATGAAGCACCTGAAATATTGGGTATCGAAGGCTCACCATATGAAGGCATATGCATGAAAAATGTCAGTATTCTTGGCTTGCATTCATCAGCAAGTTGGCATTGCGAACATGTTTCAGGATTTACAAGCGATGTTTATCCACCTCCATGCCCTCAGCTAGATGTTAACATTAGTACATCGTCATGTGGTCGGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83471.p1 GENE.S_Transcript_83471~~S_Transcript_83471.p1 ORF type:complete len:490 (+),score=67.35,Glyco_hydro_28|PF00295.13|1.2e-45,Pectate_lyase_3|PF12708.3|2.7e-14 S_Transcript_83471:269-1738(+)
MTMQMRTEDEKPLLGTIINGAIIWRPISWAFLLLFFITLAVLSLPFTTKTFSSPPPPWPFSGQLPIRVDPNSCSGFFQGDPTRKFVMSITEFGGIGDGKTSNTQAFQKAVDYLKKFDKIGGSQLIVPKGRWATGSFNLTSNFTLFLEEGAYILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNSISNVVITGHNGTIDGQGRMWWDMWWNRTLERTRGHLVQFVNSQNIMIYNLTFRNSPFWTIHPVYCRNVLVKNMTILAPLNAPNTDGVDPDSSTDVCIEDCYVESGDDLVAIKSGWDQYGIEMARPSSNIIVKRISGTTPTCSGVGIGSEMSGGIFNISVEDIHVWNSAAGVRIKTDAGRGGYIANISISNLKLERVKVPIKFSRGANDHPDDKWDPKAVPRVSRVFISNVVSLKSNEAPEILGIEGSPYEGICMKNVSILGLHSSASWHCEHVSGFTSDVYPPPCPQLDVNISTSSCGRL*

Click here to download the sequence:
Link to NCBI Protein BLAST