Transcript Information: S_Transcript_8354.p1


Annotated TAIR IDAT1G08530.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09995.2); Has 140 Blast hits to 140 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2701252-2702952 | Forward length=257
E-Value1.8E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.30650061759
Replicate 29.057355713085
Replicate 39.1243010097813
Condition 2: 8 Hour
Replicate 113.468667568716
Replicate 210.597191460923
Replicate 311.555433175332
Condition 3: 24 Hour
Replicate 18.7379533962377
Replicate 28.9462414117161
Replicate 37.3011181172705


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8354.p1 GENE.S_Transcript_8354~~S_Transcript_8354.p1 ORF type:5prime_partial len:190 (+),score=42.65 S_Transcript_8354:2-571(+)
AATTTTGTGGAAATTCGAAACCCTAATGTCCCGCCTTTCATTTCTTCGTGGTCTCTCAAGTTCAGTCCTAGTGATCGCGCCTTTTTCATTTTGACATTCATCGCCTCTACGACTTGTGTGGCATTGATTAGTTTTGTTGCTGCCGCTGTTCCCACATTGTATGCTATGGGAAGAGCTGCTAACTCTTTCGCGAAGCTAGCAGATACTGCACGAGAGGAGCTTCCGGGTACAATGGCTGCTATTAGACTTTCAGGCATGGAAACCAGTGATCTTACCATAGAATTGAGTGACCTGAGCCAGGAGATATCAGAAGGCGTGAATAAGTCTGCCCAAGTTGTTCAAGCAGCAGAAGTTGGAGTTCGACAGATTGGTGCTCTTGCTCACAGACAGACTGCCTCACTGATTGAGGAGAGAGCGAACCTTCCTGTCATCTCTTTGCGTCCTGTAATCTCTGGTGCTGCAAAGAAGACTTCCCGTGCTGTTGGCTATGCCACAAGGAGCTTTCTAAATATAATTTCTGGAAAAGAACTTATCTCAGAGAACAAAGCAGATGATTCGGTTGACACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8354.p1 GENE.S_Transcript_8354~~S_Transcript_8354.p1 ORF type:5prime_partial len:190 (+),score=42.65 S_Transcript_8354:2-571(+)
NFVEIRNPNVPPFISSWSLKFSPSDRAFFILTFIASTTCVALISFVAAAVPTLYAMGRAANSFAKLADTAREELPGTMAAIRLSGMETSDLTIELSDLSQEISEGVNKSAQVVQAAEVGVRQIGALAHRQTASLIEERANLPVISLRPVISGAAKKTSRAVGYATRSFLNIISGKELISENKADDSVDT*

Click here to download the sequence:
Link to NCBI Protein BLAST