Transcript Information: S_Transcript_83570.p2


Annotated TAIR IDAT3G04130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1084136-1085662 | Forward length=508
E-Value3E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3482059913395
Replicate 22.0394175221232
Replicate 31.7822812181631
Condition 2: 8 Hour
Replicate 12.060857047454
Replicate 24.041972653396
Replicate 34.0303073202696
Condition 3: 24 Hour
Replicate 13.0289124167631
Replicate 23.0472351699291
Replicate 33.815099153715


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83570.p2 GENE.S_Transcript_83570~~S_Transcript_83570.p2 ORF type:complete len:238 (+),score=45.96,PPR_2|PF13041.2|0.00072,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|5.5e-12,PPR_2|PF13041.2|5e-05,PPR_2|PF13041.2|4.6e-10,PPR_2|PF13041.2|5.6e+03,PPR_1|PF12854.3|8.6e-06,PPR_1|PF12854.3|0.0094,PPR_1|PF12854.3|2.7e-10,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|5.2e-09,PPR|PF01535.16|0.028,PPR|PF01535.16|0.024,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|7.9e+02,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|9.8e+03,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|83,PPR_3|PF13812.2|6.8e-05,PPR_3|PF13812.2|6e+02,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|8.4e+03 S_Transcript_83570:1010-1723(+)
ATGGAAGCCCAGGGCTGCCAACCTAGTGTTGTTACTTACACAGTTGTAATTTCCTCTTTAGCAAAGGCTGAGAAACTTGAAGTGGCTCTGAATATAGCTGATAGAGCGAAATCTTCTGAATGTAAACCTGACACCTTGTTTTACAATTCATTGATATATACACTTGGACAGGCTTGGAAGTTGAGGGAAGCCTTGGATGTTTTTAAGGTTGAGATGCCTAAGACTGGTGTTGCTCCAAATACTTCTACCTACAATACCTTGATAGACATGTTTTGCCGTCATGGTCAACTACAGATGGCTTCAGACATTCTTCAAGATATGGAGGATTCAGTAATCTGTAAACCAGATGCTTGGACGTTCTACCCATTGCTTAAAGCCAGCTTCCAATTGGTAATGATAGATGGTTACTTGAGCAAACTCTTGGAAGATATGGTTAAGAAGCATCATCTTAGTCTTGATGTTTCAACATATTCACTGTTGATTCACGGTTATTGTAGAGTTGATCGATGTGAATCGGCTTTCCATCTATTTGAGGAGATGATACGCAAGGAGCTGACACCACTGTACTGTACTTGTCGGATGTTGTTGGATAAAGTTAAAGAAAGGAACATGTACGATGCTGCTGAAAGGGTTGAGCTTTATATGAAGCATTTGAAAGCTTCCCGAAAGCAGGGTTTTCCAGGTTCCAATGCAAGCATTGCGTCTACTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83570.p2 GENE.S_Transcript_83570~~S_Transcript_83570.p2 ORF type:complete len:238 (+),score=45.96,PPR_2|PF13041.2|0.00072,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|5.5e-12,PPR_2|PF13041.2|5e-05,PPR_2|PF13041.2|4.6e-10,PPR_2|PF13041.2|5.6e+03,PPR_1|PF12854.3|8.6e-06,PPR_1|PF12854.3|0.0094,PPR_1|PF12854.3|2.7e-10,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|5.2e-09,PPR|PF01535.16|0.028,PPR|PF01535.16|0.024,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|7.9e+02,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|9.8e+03,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|83,PPR_3|PF13812.2|6.8e-05,PPR_3|PF13812.2|6e+02,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|8.4e+03 S_Transcript_83570:1010-1723(+)
MEAQGCQPSVVTYTVVISSLAKAEKLEVALNIADRAKSSECKPDTLFYNSLIYTLGQAWKLREALDVFKVEMPKTGVAPNTSTYNTLIDMFCRHGQLQMASDILQDMEDSVICKPDAWTFYPLLKASFQLVMIDGYLSKLLEDMVKKHHLSLDVSTYSLLIHGYCRVDRCESAFHLFEEMIRKELTPLYCTCRMLLDKVKERNMYDAAERVELYMKHLKASRKQGFPGSNASIASTE*

Click here to download the sequence:
Link to NCBI Protein BLAST