Transcript Information: S_Transcript_83808.p1


Annotated TAIR IDAT2G43420.1
Annotated Gene Name3-beta hydroxysteroid dehydrogenase/isomerase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18031493-18034936 | Reverse length=561
E-Value3E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8093399302291
Replicate 20.7104297174155
Replicate 30.7258321893367
Condition 2: 8 Hour
Replicate 12.5178457261731
Replicate 23.0015897101601
Replicate 33.4700217031365
Condition 3: 24 Hour
Replicate 11.2505121139517
Replicate 20.60815236788052
Replicate 30.721918981184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83808.p1 GENE.S_Transcript_83808~~S_Transcript_83808.p1 ORF type:complete len:559 (+),score=71.04,3Beta_HSD|PF01073.15|1.4e-68,Reticulon|PF02453.13|7.1e-24,Epimerase|PF01370.17|6e-23,RmlD_sub_bind|PF04321.13|2.3e-07,GDP_Man_Dehyd|PF16363.1|4.6e-06 S_Transcript_83808:123-1799(+)
ATGGAAGATCACATTAATCAGTGCCAAAACCCTAACACAACTACTTGCGTAGTGATCGGAGGTCAGAGCTTCATTGGCCGATTCCTCGTTCTGCGGCTCTTGCAACTCGGCAATTGGATCGTCCGAATCGCCGATTCTTCTCCCAGTCTTCACGCCGAGCAACAATCTCCTCTTTTTGACGCTGTTTCTGATGGCCGTGCCTCTCATTTCCTCCTCGATCTTCGCGACAAGTCTCAGCTCCTCAAAGCGATTGATGGGTCATCAACTGTCTTCTATGTGGAAACCACTGACGCATCTATGTGTGATCTATATGAAAGTTATATGCTCATCGTTCAAGGTGCGAAAAATGTCATCAATGCTTGCCGGGAGTGTAAAGTGAAACGACTAGTATACAACAGCTCTGCGGATGTTGTTTTTGATGGTACACATCACATACGAAATGCTGATGAATCTATGCGCTACCCGTGGGAATATGTAGACATGTTCACAGAGATGAAAGCTCAAGCAGAGTCACTGATCTTGTCTGCTAATGACTATGACGGTCTCTTAACATGTGCAATTCGTCCTAGCCATGTGTTTGGACCAGGAGATACAAATTTTGTGCACATTCTGGTGAATCAAGCCAATTCCCTATGGGCAAAGTTTCTTGTAGGGAGCCGTGATATTCTGTCTGACTTCACCTATGTTGAGAATGTGGCCCATGCACACATCTGTGCTGCTGAAGCTCTTGTTTCTCAGACTGTTTCTGTGTCTGGAAAGGCATTTTTCATCACAAATCTTGAAAGAAGGAACTACTGGGACTTTATTTCCAGATTATATGAAGGCCTGGGATACGAAAGGCCTCATATTAAGCTTCCTCACAAGCTGGTCAGCTTCGTACTTCCATTGGTGAGGTGGGCACGTTACAAGTTGGGATCTGAAACTGAAGTTGGTGAAGTATTGGTCTTTGCTCAATTTGTTATTGAATCATCATTATTTAACAGAACTTTCAACTGTTCTGCTGCTAAAGAACATATCAAATACACGCCTATTGTCTCAATGGAAGAAGGTATTGCTTTGACTGTCAAGTCCTTATCCCATTTGGCTAAAGGCTCATTACCTTCTAAAGAGACTCACTTTCGTGAGTTATCAAAAGCAGAAGAGATTTTGGGCTATGGGAAAGTTGCTGACATACTGCTGTGGAGAGATGAGATGGAAACATTCACATGTTTTCTTGTTACGGTTGGATTATTTTACTGGTTTTTTCTGAGTGGACGGACATTCATCTCATCCACTGCTGGGCTTCTGCTGCTCGCCACATTTTTCCTCATTGTAAATAGCCTTCTTCCATTCAACATCTTCCAGAAGATCCCCTTGCCACATCCTGAAATCCCAGAGTCAAAAATGAGAAGTCTAATTGAATACATAGCATGTGCTTGGAATGAAGGGGTTAGTATAGCGAAATCCGTGGCAGAAGGAGAGGATTGGTGTAAGTTCCTGAAGACCGCAATTCCCCTATATTTTCTCAAGTTGATAATTTCACGCTCATTTGCGTTGTTGGTTGGATCAGGTAATAAGCTTTGTAACCTTCAGAGTCTCTTGTACATTCTTTTCAGTTGCTTTTTGTCTGACCTTGCTGTGAATGAATGCAGTGTTGGTCTTTGCATTTACATCTTTCTTTATCTACGAGCAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83808.p1 GENE.S_Transcript_83808~~S_Transcript_83808.p1 ORF type:complete len:559 (+),score=71.04,3Beta_HSD|PF01073.15|1.4e-68,Reticulon|PF02453.13|7.1e-24,Epimerase|PF01370.17|6e-23,RmlD_sub_bind|PF04321.13|2.3e-07,GDP_Man_Dehyd|PF16363.1|4.6e-06 S_Transcript_83808:123-1799(+)
MEDHINQCQNPNTTTCVVIGGQSFIGRFLVLRLLQLGNWIVRIADSSPSLHAEQQSPLFDAVSDGRASHFLLDLRDKSQLLKAIDGSSTVFYVETTDASMCDLYESYMLIVQGAKNVINACRECKVKRLVYNSSADVVFDGTHHIRNADESMRYPWEYVDMFTEMKAQAESLILSANDYDGLLTCAIRPSHVFGPGDTNFVHILVNQANSLWAKFLVGSRDILSDFTYVENVAHAHICAAEALVSQTVSVSGKAFFITNLERRNYWDFISRLYEGLGYERPHIKLPHKLVSFVLPLVRWARYKLGSETEVGEVLVFAQFVIESSLFNRTFNCSAAKEHIKYTPIVSMEEGIALTVKSLSHLAKGSLPSKETHFRELSKAEEILGYGKVADILLWRDEMETFTCFLVTVGLFYWFFLSGRTFISSTAGLLLLATFFLIVNSLLPFNIFQKIPLPHPEIPESKMRSLIEYIACAWNEGVSIAKSVAEGEDWCKFLKTAIPLYFLKLIISRSFALLVGSGNKLCNLQSLLYILFSCFLSDLAVNECSVGLCIYIFLYLRAI*

Click here to download the sequence:
Link to NCBI Protein BLAST