Transcript Information: S_Transcript_83847.p1


Annotated TAIR IDAT1G50120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18562302-18566015 | Forward length=532
E-Value2.4E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7276483260434
Replicate 23.7280613933751
Replicate 33.7805054575802
Condition 2: 8 Hour
Replicate 15.907310337156
Replicate 26.1971879888439
Replicate 35.3732469031947
Condition 3: 24 Hour
Replicate 14.840971410658
Replicate 23.6412772061722
Replicate 34.1221623819996


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83847.p1 GENE.S_Transcript_83847~~S_Transcript_83847.p1 ORF type:complete len:361 (+),score=79.19,Rgp1|PF08737.6|3.5,Rgp1|PF08737.6|0.0001 S_Transcript_83847:161-1243(+)
ATGCCACCACCTGAAAATCTAAGCAGAAGATTTTCATTCTTCGGGTTCGGTGATTCAAGCAGCAGTAAAGTAGATTCAAGGACCTCATCTTCAATCATCAACAACGATCAACAAGAATTGGTGCCAATTTTGAAGCTTCAAACTGATAAAAATGTGTACAGGCCTGGCGACGAGGTTTCGGTGATCATTGAGATTCAAAGCCCTCGCGATCCTACCGAATCGAATCGGAATGAGATTAGGAGCAGCTCAGAGCGTTCTCTTTTGGTCGAGAAACTCAGTTTCGAGCTCAAAGGTGTTGAGAAACTTGATTCTCAATGGTTCTCCACTCCCAAACCCTTGCCTGGAGTTAAACATCGTCGAGGCGAGCATGTTTTCTTGGATTCTTCTACAACATCATTAGTTTCAAATCAAATCATTTCATCAGGGGCCACAAAGAAGTATGTGGTTCGTACAGTTTTGCCCAGTGTTATTCCACCTTCATACAGGGGTACAACCATTCGATACTTGTACTATGTTAGAATTGCTTTATCGGGACAATGGTTGATATTGGAAAATGGCCATTCCGATAGAGATGTAGTAAAAAATGTTACTGGTGTGGAAGCTCGTGTTCCCTTGCAAATATGGGTTACCCAAAGGGGAAGTGGATTATTGAATGAAGAAAGTCAAGCTGATGGGATTGTTTCTAACCAGACCATCCAAACAGATATTTATTGGAAAGAGATGTACAGGGATTCAGAATGGGCTAGGGCTAATGAAATATACGATGGAGCTGAGGAAGGTTATGACAGCTCAAGGGATGAAATTTCATCTGTTTCCTCATATAATCCCTCGAGAGAAAGTATTCACAAGGCTTTTGGAAGCTCATCATCTCTCCACAGATCAGCATCAAGGTCGTTTAGAGAACCTTTGCATGCAGAAGCTGATGAAGTTCTGCACAATGCAAGTGGGGATATTTTATCATCCAACAGTCATCCAGCTGTATTCTCACCAAGCCAGCAAAAAAGATTGTCAAAATCATTTTCGAAAGATAGTGATGGAAAGGAGGTGTCTTCTCCATTGGAACCTGCAGAATCTGTTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83847.p1 GENE.S_Transcript_83847~~S_Transcript_83847.p1 ORF type:complete len:361 (+),score=79.19,Rgp1|PF08737.6|3.5,Rgp1|PF08737.6|0.0001 S_Transcript_83847:161-1243(+)
MPPPENLSRRFSFFGFGDSSSSKVDSRTSSSIINNDQQELVPILKLQTDKNVYRPGDEVSVIIEIQSPRDPTESNRNEIRSSSERSLLVEKLSFELKGVEKLDSQWFSTPKPLPGVKHRRGEHVFLDSSTTSLVSNQIISSGATKKYVVRTVLPSVIPPSYRGTTIRYLYYVRIALSGQWLILENGHSDRDVVKNVTGVEARVPLQIWVTQRGSGLLNEESQADGIVSNQTIQTDIYWKEMYRDSEWARANEIYDGAEEGYDSSRDEISSVSSYNPSRESIHKAFGSSSSLHRSASRSFREPLHAEADEVLHNASGDILSSNSHPAVFSPSQQKRLSKSFSKDSDGKEVSSPLEPAESVA*

Click here to download the sequence:
Link to NCBI Protein BLAST