Transcript Information: S_Transcript_83849.p1


Annotated TAIR IDAT1G50120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18562302-18566015 | Forward length=532
E-Value2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5472675136733
Replicate 22.9930140872598
Replicate 31.429669463845
Condition 2: 8 Hour
Replicate 11.5704744807191
Replicate 22.9482281153128
Replicate 33.3047825744157
Condition 3: 24 Hour
Replicate 11.2700513657322
Replicate 22.0204173110697
Replicate 31.173118344424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83849.p1 GENE.S_Transcript_83849~~S_Transcript_83849.p1 ORF type:complete len:258 (+),score=37.39,Rgp1|PF08737.6|6.5,Rgp1|PF08737.6|5.8e-05 S_Transcript_83849:224-997(+)
ATGCCACCACCTGAAAATCTAAGCAGAAGATTCTCATTCTTCGGGTTCGGCGATTCGAGCTACAGTAAAGTAGATTCAAAATTTTCATCTTCAATCAACAACAACAACAACGATCAACAAGAATTGGTGCCAATTTTGAAGCTTCAAACTGATAAAAATGTGTACAGGCCTGGCGACGAGGTTTCGGTGATCATTGAGATTCAAAGCCCTCGCGATCCTACCGAATCGAATCGGAATGAGATTAGGAGCAGCTCAGAGCGTTCTCTTTTGGTCGAGAAACTCAGTTTCGAGCTCAAAGGTGTTGAGAAACTTGATTCTCAATGGTTCTCCACTCCCAAACCCTTGCCTGGAGTTAAACATCGTCGAGGCGAGCATGTTTTCTTGGATTCTTCTACAACATCATTAGTTTCAAATCAAATCATTTCATCAGGGGCCACAAAGAAGTATGTGGTTCGTACAGTTTTGCCCAGTGTTATTCCACCTTCATACAGGGGTACAACCATTCGATACTTGTACTATGTTAGAATTGCTTTATCGGGACAATGGTTGATATTGGAAAATGGCCATTCCGATATAGTAAAAAATGTTACTGGTGTGGAAGCTCGTGTTCCCTTGCAAATATGGGTTACCCAAAGGGGAAGTGGATTATTGAATGAAGAAAGTCAAGCTGATGGGATTGTTTCTAACCAGACCATCCAAACAGATATTTATTGGAAAGAGATGTACAGGGATTCAGAATGGGTAAGCTACTGGATTTTATCATTTCATACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83849.p1 GENE.S_Transcript_83849~~S_Transcript_83849.p1 ORF type:complete len:258 (+),score=37.39,Rgp1|PF08737.6|6.5,Rgp1|PF08737.6|5.8e-05 S_Transcript_83849:224-997(+)
MPPPENLSRRFSFFGFGDSSYSKVDSKFSSSINNNNNDQQELVPILKLQTDKNVYRPGDEVSVIIEIQSPRDPTESNRNEIRSSSERSLLVEKLSFELKGVEKLDSQWFSTPKPLPGVKHRRGEHVFLDSSTTSLVSNQIISSGATKKYVVRTVLPSVIPPSYRGTTIRYLYYVRIALSGQWLILENGHSDIVKNVTGVEARVPLQIWVTQRGSGLLNEESQADGIVSNQTIQTDIYWKEMYRDSEWVSYWILSFHT*

Click here to download the sequence:
Link to NCBI Protein BLAST