Transcript Information: S_Transcript_83856.p1


Annotated TAIR IDAT3G19770.1
Annotated Gene NameVacuolar sorting protein 9 (VPS9) domain
Annotated Gene Symbol(s)ATVPS9A, VPS9A, VPS9
Annotation TypeOrtholog
Chromosome Positionchr3:6866916-6869114 | Forward length=520
E-Value3.9E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7470241511059
Replicate 21.5931554822713
Replicate 32.017804823151
Condition 2: 8 Hour
Replicate 12.3331936889642
Replicate 22.0560561113097
Replicate 32.0522916731273
Condition 3: 24 Hour
Replicate 11.4818192302154
Replicate 22.0828885912617
Replicate 31.4349521981029


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83856.p1 GENE.S_Transcript_83856~~S_Transcript_83856.p1 ORF type:complete len:457 (+),score=124.96,VPS9|PF02204.14|2e-31 S_Transcript_83856:191-1372(+)
ATGGCTTTAGTTCAGCAATTTATTCGGCCTGAAAATTTGGATATTAAGCCTACCTTCCAAAATGAGTCGTCATGGCTGCTTGCACAAAAGGAGCTGCAGAAGATGAATATGTACAAGGCTCCCAGAGAAAAGCTTGCTTGTATTCTTAACTGCTGCAAGGTCATAACTAATCTGCTACACAATGCTGCTGTTGCTGCTAATGAAAATCCCCCTGGAGCTGATGAATTTCTTCCAGTTCTTATTTATGTGACAATAAAGGCCAACCCTCCCCAGCTGCACTCAAACTTGTTGTATATACAGCAATATAGACGTCAATCTCGATTGGTTTCTGAGACAGCCTACTACTTCACAAATATTCTTTCTGCTGAATCCTTCATCTCAAATATTGATGCTCAGTCCCTTTCGATGGACGAAGTGGAATTTGAAAGGAATATGGAATCTGCTCGGGCACTTCTATCTGGCCTAACATCTGATTTTGAGAATAATGCGACTGCTGAAAGTGCTTCCAGTTCAAAGCCATTGGAGTACAAGCAACAAGCTTTGACGCCTAATGAAAAGGATTCCACACGACAACCTCGAGTGTCCTCAGAGTCTTCTGCCATGAAATCCGGTGGCAAGGAGGATGCACAAGTGAAAGATCAATCATCAATGACAAAAGTTATGTCCATATCTGATTTAGAGGAAAAAGGCGCAACTGTGATATTGAAGGATGATGGCATTAACAATATTTTTAAAGAGTTCCCTTACGTATTTTCCAGTTTTGGGGATCTAACTTTGCATGACGTTGAAGACTTGCTCAATAACTATCGACAGCTTGTATTCAAGTATGTCTGCCTTGCCAAAGGGCTTGGCATCACGCCATCTCCCCCGTCCATTCCACAAGCCCAAGCCCAGGGCCAGATGGAAACCAGGGAAAGATCTGAAGCTGATAGAGTCCGAGAAACAAATGAAAATAATGCTGACAACCATGATCAATCCTTTGCAAATTCGCATCCTGAAATGGGAATTCCTGAATCAAATTTGCCCCAAGATAATGCTGACACTATTCTTAAGGAGGAAGAAAGCTGTGAAGTGGCCCCACCTTCTGGAGATTCCGAAGCTGTGGTGCCTCAGGAGGGGGCTACTGGTCTTCCTAGTGGTGAGCAAAATGCCGAAACTTGGGCACCGTCGGGCAAACAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83856.p1 GENE.S_Transcript_83856~~S_Transcript_83856.p1 ORF type:complete len:457 (+),score=124.96,VPS9|PF02204.14|2e-31 S_Transcript_83856:191-1372(+)
MALVQQFIRPENLDIKPTFQNESSWLLAQKELQKMNMYKAPREKLACILNCCKVITNLLHNAAVAANENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQQYRRQSRLVSETAYYFTNILSAESFISNIDAQSLSMDEVEFERNMESARALLSGLTSDFENNATAESASSSKPLEYKQQALTPNEKDSTRQPRVSSESSAMKSGGKEDAQVKDQSSMTKVMSISDLEEKGATVILKDDGINNIFKEFPYVFSSFGDLTLHDVEDLLNNYRQLVFKYVCLAKGLGITPSPPSIPQAQAQGQMETRERSEADRVRETNENNADNHDQSFANSHPEMGIPESNLPQDNADTILKEEESCEVAPPSGDSEAVVPQEGATGLPSGEQNAETWAPSGKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST