Transcript Information: S_Transcript_83919.p1


Annotated TAIR IDAT5G57960.1
Annotated Gene NameGTP-binding protein, HflX
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23463133-23466481 | Reverse length=540
E-Value6.1E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99798754631927
Replicate 20.8273546084068
Replicate 31.290991525852
Condition 2: 8 Hour
Replicate 11.0129560400638
Replicate 21.0067331887877
Replicate 30.47960657111208
Condition 3: 24 Hour
Replicate 10.27306104363243
Replicate 20.79323340517216
Replicate 30.37833066607674


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83919.p1 GENE.S_Transcript_83919~~S_Transcript_83919.p1 ORF type:3prime_partial len:400 (+),score=82.36,GTP-bdg_M|PF16360.1|8.6e-27,GTP-bdg_N|PF13167.2|4.3e-24,GTP-bdg_N|PF13167.2|5.8e+03,MMR_HSR1|PF01926.19|4.2e+03,MMR_HSR1|PF01926.19|1.6e-20,DUF258|PF03193.12|0.0011,DUF258|PF03193.12|0.0012,FeoB_N|PF02421.14|1.5e-07,Dynamin_N|PF00350.19|0.00018,Dynamin_N|PF00350.19|25 S_Transcript_83919:512-1708(+)
ATGTACTACTGGGTCTTACAGTGTGGGGCACATTCTGGCATCCTTTTGCCATCTCTGCCTCTGCCCTCTGGAGCCTCTCTGATGGACCAAAAGCTTTGCTTTTTGATGTTTATTGTTCTCAAATGGTTATTCCTAGTACTATACACAACAATTCTCCATTGGCTACCACCTATCCCTTTTCTTTTCATCTCTTTTGGTCTGTGGGAAGTAAGGGGATGGTTAAATGACATTTATGTTTTTGGATTGTCATCCAGGCTTGCTACGCCTAATCCACGGACGTATATTGGCTCTGGCAAGGTTGCCGAAATCAAGAGTGCAATTCATGCATTGGATGTTGAAACAGTTATTTTTGATGATGAGCTTTCACCAGGCCAATTGCGTAATTTGGAGAAAGCTTTTGGAGGAGATGTTAGAGTATGTGACAGGACAGCTCTAATTCTGGATATTTTCAACCAGAGAGCAGCAACACATGAAGCTGCTTTACAGGTCACATTGGCACAAATGGAATACCAATTACCACGATTGACAAGATTGTGGACTCACTTGGAACGACAAGCAGGAGGGAGGGTGAAGGGTATGGGTGAGAAGCAAATTGAGGTGGACAAGCGTATTCTACGAGATCAAATTGGTGCTCTCAAAAAAGAGCTGGAATCTGTCCGACGACATAGAAAGCTGTATCGAAATCGCCGTGTGTCAGTTCCTATTCCTGTTGTATCTTTAGTAGGATACACAAATGCTGGAAAGAGTACTCTGTTAAACCAATTGACTGGAGCAAATGTCCTTGCTGAAAATCGATTGTTTGCTACACTTGATCCAACAACAAGAAGGGTGCAGATGAAGAACGGGAAGGAGTTTCTTATTACTGATACTGTCGGATTTATTCAAAAGTTACCAACTTTGCTGGTTGCTGCTTTCAGAGCCACGCTGGAGGAAATATCTGAATCATCACTACTGGTGCATGTGGTGGACATCAGCCATCCCTTGGCTGAGCAACAGATTGAAGCTGTAGAAAAAGTTCTAGCCGAGTTGGATGTTTCATCAATACCAATTTTGATGGTGTGGAACAAGGTTGATAAGGTGAGTGATCCAGAGAAAATTAAAGCGGAAGCAAAACAACTTGGAAATGTAGTTTGTGTATCTGCTTTGAATGGTGATGGACTAGACGACTTCGGTAATGCCATTCAGGAGAAGTTGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83919.p1 GENE.S_Transcript_83919~~S_Transcript_83919.p1 ORF type:3prime_partial len:400 (+),score=82.36,GTP-bdg_M|PF16360.1|8.6e-27,GTP-bdg_N|PF13167.2|4.3e-24,GTP-bdg_N|PF13167.2|5.8e+03,MMR_HSR1|PF01926.19|4.2e+03,MMR_HSR1|PF01926.19|1.6e-20,DUF258|PF03193.12|0.0011,DUF258|PF03193.12|0.0012,FeoB_N|PF02421.14|1.5e-07,Dynamin_N|PF00350.19|0.00018,Dynamin_N|PF00350.19|25 S_Transcript_83919:512-1708(+)
MYYWVLQCGAHSGILLPSLPLPSGASLMDQKLCFLMFIVLKWLFLVLYTTILHWLPPIPFLFISFGLWEVRGWLNDIYVFGLSSRLATPNPRTYIGSGKVAEIKSAIHALDVETVIFDDELSPGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQVTLAQMEYQLPRLTRLWTHLERQAGGRVKGMGEKQIEVDKRILRDQIGALKKELESVRRHRKLYRNRRVSVPIPVVSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMKNGKEFLITDTVGFIQKLPTLLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVEKVLAELDVSSIPILMVWNKVDKVSDPEKIKAEAKQLGNVVCVSALNGDGLDDFGNAIQEKLK

Click here to download the sequence:
Link to NCBI Protein BLAST