Transcript Information: S_Transcript_83920.p1


Annotated TAIR IDAT5G57960.1
Annotated Gene NameGTP-binding protein, HflX
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23463133-23466481 | Reverse length=540
E-Value3.5E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33183293310699
Replicate 20.9903496559483
Replicate 32.345584888438
Condition 2: 8 Hour
Replicate 11.7017767834121
Replicate 22.7895073116866
Replicate 32.7109930869178
Condition 3: 24 Hour
Replicate 12.8872289900287
Replicate 20.9042917337196
Replicate 32.3901189211831


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83920.p1 GENE.S_Transcript_83920~~S_Transcript_83920.p1 ORF type:5prime_partial len:401 (+),score=96.29,GTP-bdg_N|PF13167.2|4.9e-34,GTP-bdg_N|PF13167.2|1.1e+04,GTP-bdg_M|PF16360.1|8.7e-27,MMR_HSR1|PF01926.19|2.7e+02,MMR_HSR1|PF01926.19|1.9e-18,FeoB_N|PF02421.14|8e-06,DUF258|PF03193.12|5.1e+03,DUF258|PF03193.12|5.4e+03,DUF258|PF03193.12|0.0011,DUF258|PF03193.12|55 S_Transcript_83920:3-1205(+)
CTCTCTCCTCTTCCTGAAGTAGAAGTGGGTCATTTTGAAGACCCAGTTGAGAATGATTATGAGGGTTGGGAAGACCAAGTGGGTTCAGTTCAAGTGCAAGAAAAAGATGAGGAGGAGGATAGTCGTTATAAGCTCAGGAATGGCAAAGAGGTTCTTGCAGAAAAAGCCTATCTTGTAGGTGTGGAGCATAAAGGTGTTAGAGTGGATACTTTTGGAATAGAGGAATCTCTAGATGAATTGGGCCAATTAGCTGACACAGCAGGGCTTCAGGTTGTTGGTTCTACTTACCAAAAGCTTGCTACGCCTAATCCACGGACGTATATTGGCTCTGGCAAGGTTGCCGAAATCAAGAGTGCAATTCATGCATTGGATGTTGAAACAGTTATTTTTGATGATGAGCTTTCACCAGGCCAATTGCGTAATTTGGAGAAAGCTTTTGGAGGAGATGTTAGAGTATGTGACAGGACAGCTCTAATTCTGGATATTTTCAACCAGAGAGCAGCAACACATGAAGCTGCTTTACAGGTCACATTGGCACAAATGGAATACCAATTACCACGATTGACAAGATTGTGGACTCACTTGGAACGACAAGCAGGAGGGAGGGTGAAGGGTATGGGTGAGAAGCAAATTGAGGTGGACAAGCGTATTCTACGAGATCAAATTGGTGCTCTCAAAAAAGAGCTGGAATCTGTCCGACGACATAGAAAGCTGTATCGAAATCGCCGTGTGTCAGTTCCTATTCCTGTTGTATCTTTAGTAGGATACACAAATGCTGGAAAGAGTACTCTGTTAAACCAATTGACTGGAGCAAATGTCCTTGCTGAAAATCGATTGTTTGCTACACTTGATCCAACAACAAGAAGGGTGCAGATGAAGAACGGGAAGGAGTTTCTTATTACTGATACTGTCGGATTTATTCAAAAGTTACCAACTTTGCTGGTTGCTGCTTTCAGAGCCACGCTGGAGGAAATATCTGAATCATCACTACTGGTGCATGTGGTGGACATCAGGTATCTTTTGGTCTTCATGTTTGGATCTAAGTCTTGTTTCCTTCACCACCTTATTATACTCTTTGTGAGTTTCAGCCATCCCTTGGCTGAGCAACAGATTGAAGCTGTAGAAAAAGTTCTAGCCGAGTTGGATGTTTCATCAATACCAATTTTGATGGTGTGGAACAAGGTATCATGTGAAAAGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83920.p1 GENE.S_Transcript_83920~~S_Transcript_83920.p1 ORF type:5prime_partial len:401 (+),score=96.29,GTP-bdg_N|PF13167.2|4.9e-34,GTP-bdg_N|PF13167.2|1.1e+04,GTP-bdg_M|PF16360.1|8.7e-27,MMR_HSR1|PF01926.19|2.7e+02,MMR_HSR1|PF01926.19|1.9e-18,FeoB_N|PF02421.14|8e-06,DUF258|PF03193.12|5.1e+03,DUF258|PF03193.12|5.4e+03,DUF258|PF03193.12|0.0011,DUF258|PF03193.12|55 S_Transcript_83920:3-1205(+)
LSPLPEVEVGHFEDPVENDYEGWEDQVGSVQVQEKDEEEDSRYKLRNGKEVLAEKAYLVGVEHKGVRVDTFGIEESLDELGQLADTAGLQVVGSTYQKLATPNPRTYIGSGKVAEIKSAIHALDVETVIFDDELSPGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQVTLAQMEYQLPRLTRLWTHLERQAGGRVKGMGEKQIEVDKRILRDQIGALKKELESVRRHRKLYRNRRVSVPIPVVSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMKNGKEFLITDTVGFIQKLPTLLVAAFRATLEEISESSLLVHVVDIRYLLVFMFGSKSCFLHHLIILFVSFSHPLAEQQIEAVEKVLAELDVSSIPILMVWNKVSCEKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST