Transcript Information: S_Transcript_83921.p1


Annotated TAIR IDAT5G57960.1
Annotated Gene NameGTP-binding protein, HflX
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23463133-23466481 | Reverse length=540
E-Value6.3E-266
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.505242247048
Replicate 245.708142079071
Replicate 348.830451023035
Condition 2: 8 Hour
Replicate 192.365034432646
Replicate 2101.57008074407
Replicate 389.310703256314
Condition 3: 24 Hour
Replicate 144.196715754177
Replicate 246.475157916054
Replicate 345.016560267359


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83921.p1 GENE.S_Transcript_83921~~S_Transcript_83921.p1 ORF type:5prime_partial len:474 (+),score=121.05,GTP-bdg_N|PF13167.2|6.4e-34,GTP-bdg_N|PF13167.2|6.8e+03,GTP-bdg_M|PF16360.1|1.1e-26,MMR_HSR1|PF01926.19|3.3e+02,MMR_HSR1|PF01926.19|2.2e-20,DUF258|PF03193.12|6.3e+03,DUF258|PF03193.12|6.5e+03,DUF258|PF03193.12|0.0014,DUF258|PF03193.12|0.0012,FeoB_N|PF02421.14|2.2e-07,Dynamin_N|PF00350.19|2.7e+03,Dynamin_N|PF00350.19|0.00025,Dynamin_N|PF00350.19|42 S_Transcript_83921:3-1424(+)
CTCTCTCCTCTTCCTGAAGTAGAAGTGGGTCATTTTGAAGACCCAGTTGAGAATGATTATGAGGGTTGGGAAGACCAAGTGGGTTCAGTTCAAGTGCAAGAAAAAGATGAGGAGGAGGATAGTCGTTATAAGCTCAGGAATGGCAAAGAGGTTCTTGCAGAAAAAGCCTATCTTGTAGGTGTGGAGCATAAAGGTGTTAGAGTGGATACTTTTGGAATAGAGGAATCTCTAGATGAATTGGGCCAATTAGCTGACACAGCAGGGCTTCAGGTTGTTGGTTCTACTTACCAAAAGCTTGCTACGCCTAATCCACGGACGTATATTGGCTCTGGCAAGGTTGCCGAAATCAAGAGTGCAATTCATGCATTGGATGTTGAAACAGTTATTTTTGATGATGAGCTTTCACCAGGCCAATTGCGTAATTTGGAGAAAGCTTTTGGAGGAGATGTTAGAGTATGTGACAGGACAGCTCTAATTCTGGATATTTTCAACCAGAGAGCAGCAACACATGAAGCTGCTTTACAGGTCACATTGGCACAAATGGAATACCAATTACCACGATTGACAAGATTGTGGACTCACTTGGAACGACAAGCAGGAGGGAGGGTGAAGGGTATGGGTGAGAAGCAAATTGAGGTGGACAAGCGTATTCTACGAGATCAAATTGGTGCTCTCAAAAAAGAGCTGGAATCTGTCCGACGACATAGAAAGCTGTATCGAAATCGCCGTGTGTCAGTTCCTATTCCTGTTGTATCTTTAGTAGGATACACAAATGCTGGAAAGAGTACTCTGTTAAACCAATTGACTGGAGCAAATGTCCTTGCTGAAAATCGATTGTTTGCTACACTTGATCCAACAACAAGAAGGGTGCAGATGAAGAACGGGAAGGAGTTTCTTATTACTGATACTGTCGGATTTATTCAAAAGTTACCAACTTTGCTGGTTGCTGCTTTCAGAGCCACGCTGGAGGAAATATCTGAATCATCACTACTGGTGCATGTGGTGGACATCAGCCATCCCTTGGCTGAGCAACAGATTGAAGCTGTAGAAAAAGTTCTAGCCGAGTTGGATGTTTCATCAATACCAATTTTGATGGTGTGGAACAAGGTTGATAAGGTGAGTGATCCAGAGAAAATTAAAGCGGAAGCAAAACAACTTGGAAATGTAGTTTGTGTATCTGCTTTGAATGGTGATGGACTAGACGACTTCGGTAATGCCATTCAGGAGAAGTTGAAGGATTCTATGGTATGGGTTGAAGCTCTGGTTCCATTTGACAAAGGAGAACTTCTGAGTAGCATCCATCAACTTGGAATGGTGGAAAGAACTGATTATACCGAGAATGGGACTCTGGTCAAAGCCTATGTACCTCTTCGTTTAGCCAGGCTTCTTACCCCTATGAGGCAGTTGTGTGTATCATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83921.p1 GENE.S_Transcript_83921~~S_Transcript_83921.p1 ORF type:5prime_partial len:474 (+),score=121.05,GTP-bdg_N|PF13167.2|6.4e-34,GTP-bdg_N|PF13167.2|6.8e+03,GTP-bdg_M|PF16360.1|1.1e-26,MMR_HSR1|PF01926.19|3.3e+02,MMR_HSR1|PF01926.19|2.2e-20,DUF258|PF03193.12|6.3e+03,DUF258|PF03193.12|6.5e+03,DUF258|PF03193.12|0.0014,DUF258|PF03193.12|0.0012,FeoB_N|PF02421.14|2.2e-07,Dynamin_N|PF00350.19|2.7e+03,Dynamin_N|PF00350.19|0.00025,Dynamin_N|PF00350.19|42 S_Transcript_83921:3-1424(+)
LSPLPEVEVGHFEDPVENDYEGWEDQVGSVQVQEKDEEEDSRYKLRNGKEVLAEKAYLVGVEHKGVRVDTFGIEESLDELGQLADTAGLQVVGSTYQKLATPNPRTYIGSGKVAEIKSAIHALDVETVIFDDELSPGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQVTLAQMEYQLPRLTRLWTHLERQAGGRVKGMGEKQIEVDKRILRDQIGALKKELESVRRHRKLYRNRRVSVPIPVVSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMKNGKEFLITDTVGFIQKLPTLLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVEKVLAELDVSSIPILMVWNKVDKVSDPEKIKAEAKQLGNVVCVSALNGDGLDDFGNAIQEKLKDSMVWVEALVPFDKGELLSSIHQLGMVERTDYTENGTLVKAYVPLRLARLLTPMRQLCVSS*

Click here to download the sequence:
Link to NCBI Protein BLAST