Transcript Information: S_Transcript_83973.p1


Annotated TAIR IDAT3G52260.3
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19383452-19386440 | Reverse length=416
E-Value1E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5106604938849
Replicate 22.795016466855
Replicate 30.94450669969922
Condition 2: 8 Hour
Replicate 12.7590801488474
Replicate 21.9899488008382
Replicate 32.9876659715877
Condition 3: 24 Hour
Replicate 12.5907678533319
Replicate 22.1991838726375
Replicate 32.039518415508


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83973.p1 GENE.S_Transcript_83973~~S_Transcript_83973.p1 ORF type:complete len:371 (+),score=57.25,PseudoU_synth_2|PF00849.18|7.8e-24 S_Transcript_83973:104-1216(+)
ATGTCGACGACTACCAAAACCACCACCACCACCATTGGAATACCTTGGCCTGAGTTCAACGATGGCCTCTCTTACCACGACGTCGTTTCTCCTTCTCATTCTGGGTTTACTCTCATCGATTTCTACTCAACCAATCACAAAACCTCAGCCCCCTTGCAAGGTTGGTTGCAGCGAATCCACAATAGACAGATTAAGATCGATGGCGAAACTGTTACTGATCCCAACACAATTCTTAGAGCTGGGTCAGAGTTGGTGTATCATCGACTCCCGTGGAAGGAGCCTGAAACACCTTACTTGATCGAGGTGTTGTATGAAGATGATGATATGATCGCTTTGAATAAGCCATCTGGCCTGCAAGTCTTACCTGGAGGACTCTTCCAGCAGCGCACTGTCTTAACACAGCTTCAATGGCATGCAGACGAGATTAGCAATTTACCATCAGGGCAAGACCGTCATCCTGTTCCTGTTCACCGCCTTGGCAGGGGCACATCAGGATTGCTCCTTTGTGCAAAGACAAAACAGGCAAAGGCTCACCTTGCCGCATATTTTGCTGATGGAACATCGTTGGTGAGAGAAAAAAGAGAGATAAACTTAGAACTTCAAGTGGGGCGAAAGATTACCAAGATATATCGGGCACTAGTCAAGGGGATAGTAGATTTGGATGAGATTGTAATCAACCAGCCAATTGGAACAATGCGATATCCTGGTGTGGCAAGGGGTCTTTATGCTGCATTGCCCTCAGGTAAACCAGCATTGAGCAAAGTACAGGTCCTTGAAAGAGATCTAGAGAAAGATCAGACACTAGTCCAGGTGGAGATACAGTCAGGAAGGCCTCATCAAATCCGCATACATCTTTCTTTAATAGGGCATCCACTAATAGGTGATCCTCTTTATGTTGCTGGTGGTCAACCAAAGTGCTTCAACTCTGAATCAGTAGAAGAAAGTTTTGCGGAAGATGGAGGGTACCAACGTCCTGCAAAGCCAGTACCAGGAGATTGTGGGTATCACCTGCATGCACATGAAGTAACTCTTTACCACCCAACCACAGATGAGGTGATGAAGATCTTTGCACCGCTGCCTCCCGTGCTCAAGACAATGGAAGAGGCCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83973.p1 GENE.S_Transcript_83973~~S_Transcript_83973.p1 ORF type:complete len:371 (+),score=57.25,PseudoU_synth_2|PF00849.18|7.8e-24 S_Transcript_83973:104-1216(+)
MSTTTKTTTTTIGIPWPEFNDGLSYHDVVSPSHSGFTLIDFYSTNHKTSAPLQGWLQRIHNRQIKIDGETVTDPNTILRAGSELVYHRLPWKEPETPYLIEVLYEDDDMIALNKPSGLQVLPGGLFQQRTVLTQLQWHADEISNLPSGQDRHPVPVHRLGRGTSGLLLCAKTKQAKAHLAAYFADGTSLVREKREINLELQVGRKITKIYRALVKGIVDLDEIVINQPIGTMRYPGVARGLYAALPSGKPALSKVQVLERDLEKDQTLVQVEIQSGRPHQIRIHLSLIGHPLIGDPLYVAGGQPKCFNSESVEESFAEDGGYQRPAKPVPGDCGYHLHAHEVTLYHPTTDEVMKIFAPLPPVLKTMEEAR*

Click here to download the sequence:
Link to NCBI Protein BLAST