Transcript Information: S_Transcript_83974.p1


Annotated TAIR IDAT3G52260.3
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19383452-19386440 | Reverse length=416
E-Value3E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8567210164079
Replicate 21.9497348911292
Replicate 31.6298231887833
Condition 2: 8 Hour
Replicate 14.6618295111872
Replicate 24.5784248378975
Replicate 33.9657390892989
Condition 3: 24 Hour
Replicate 12.641706840723
Replicate 23.3732184671773
Replicate 32.346236688848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83974.p1 GENE.S_Transcript_83974~~S_Transcript_83974.p1 ORF type:complete len:215 (+),score=23.24,PseudoU_synth_2|PF00849.18|2.4e-10 S_Transcript_83974:104-748(+)
ATGTCGACGACTACCAAAACCACCACCACCACCATTGGAATACCTTGGCCTGAGTTCAACGATGGCCTCTCTTACCACGACGTCGTTTCTCCTTCTCATTCTGGGTTTACTCTCATCGATTTCTACTCAACCAATCACAAAACCTCAGCCCCCTTGCAAGGTTGGTTGCAGCGAATCCACAATAGACAGATTAAGATCGATGGCGAAACTGTTACTGATCCCAACACAATTCTTAGAGCTGGGTCAGAGTTGGTGTATCATCGACTCCCGTGGAAGGAGCCTGAAACACCTTACTTGATCGAGGTGTTGTATGAAGATGATGATATGATCGCTTTGAATAAGCCATCTGGCCTGCAAGTCTTACCTGGAGGACTCTTCCAGCAGCGCACTGTCTTAACACAGCTTCAATGGCATGCAGACGAGATTAGCAATTTACCATCAGGGCAAGACCGTCATCCTGTTCCTGTTCACCGCCTTGGCAGGGGCACATCAGGATTGCTCCTTTGTGCAAAGACAAAACAGGCAAAGGCTCACCTTGCCGCATATTTTGCTGATGGAACATCGTTGGTGAGAGAAAAAAGGCTAGTAAGAGTGATTGGTTTAATCTGTAATGTATTGTATACTTTTCTCAGCATTTCTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83974.p1 GENE.S_Transcript_83974~~S_Transcript_83974.p1 ORF type:complete len:215 (+),score=23.24,PseudoU_synth_2|PF00849.18|2.4e-10 S_Transcript_83974:104-748(+)
MSTTTKTTTTTIGIPWPEFNDGLSYHDVVSPSHSGFTLIDFYSTNHKTSAPLQGWLQRIHNRQIKIDGETVTDPNTILRAGSELVYHRLPWKEPETPYLIEVLYEDDDMIALNKPSGLQVLPGGLFQQRTVLTQLQWHADEISNLPSGQDRHPVPVHRLGRGTSGLLLCAKTKQAKAHLAAYFADGTSLVREKRLVRVIGLICNVLYTFLSISL*

Click here to download the sequence:
Link to NCBI Protein BLAST