Transcript Information: S_Transcript_83974.p2


Annotated TAIR IDAT3G52260.3
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19383452-19386440 | Reverse length=416
E-Value9E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.225818331537
Replicate 21.8942799115038
Replicate 32.3286282933839
Condition 2: 8 Hour
Replicate 13.2311197450202
Replicate 22.7117392290578
Replicate 32.2607717156798
Condition 3: 24 Hour
Replicate 13.8614693038929
Replicate 22.7471286759209
Replicate 32.547681253042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83974.p2 GENE.S_Transcript_83974~~S_Transcript_83974.p2 ORF type:complete len:198 (+),score=32.33,PseudoU_synth_2|PF00849.18|9.8e-11 S_Transcript_83974:1596-2189(+)
ATGCTAATGTTCAGTGGAGATAAACAACTGCTGAATAGTATTTCTTATTTTCCAAAATCCAGAGAGATAAACTTAGAGCATCAAGTGGGGCAAATGATTACCAAGATATATCGGGCACTAGTCAAGGGGATAGTAGATTTGGATGAGATTGTAATCAACCAGCCAATTGGAACAATGCGATATCCTGGTGTGGCAAGGGGTCTTTATGCTGCATTGCCCTCAGGTAAACCAGCATTGAGCAAAGTACAGGTCCTTGAAAGAGATCTAGAGAAAGATCAGACACTAGTCCAGGTGGAGATACAGTCAGGAAGGCCTCATCAAATCCGCATACATCTTTCTTTAATAGGGCATCCACTAATAGGTGATCCTCTTTATGTTGCTGGTGGCCAACCAAAGTGCTTCGACTCTGAACCAGTAGAAGAAAGTTTTGCGGAAGATGGAGGGTACCAACGTCCTGCAAAGCCAGTACCAGGAGATTGTGGGTATCACCTGCATGCACATGAAGTAACTCTTTACCACCCAACCACAGATGAGGTGATTAAGATCATTGCACCGCTGCCTCCCATGCTCAAGACGATGGAAGAGGTCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83974.p2 GENE.S_Transcript_83974~~S_Transcript_83974.p2 ORF type:complete len:198 (+),score=32.33,PseudoU_synth_2|PF00849.18|9.8e-11 S_Transcript_83974:1596-2189(+)
MLMFSGDKQLLNSISYFPKSREINLEHQVGQMITKIYRALVKGIVDLDEIVINQPIGTMRYPGVARGLYAALPSGKPALSKVQVLERDLEKDQTLVQVEIQSGRPHQIRIHLSLIGHPLIGDPLYVAGGQPKCFDSEPVEESFAEDGGYQRPAKPVPGDCGYHLHAHEVTLYHPTTDEVIKIIAPLPPMLKTMEEVR*

Click here to download the sequence:
Link to NCBI Protein BLAST