Transcript Information: S_Transcript_83981.p1


Annotated TAIR IDAT1G72220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27184388-27185629 | Reverse length=413
E-Value3.2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.26476242759
Replicate 211.556699292032
Replicate 315.368946736334
Condition 2: 8 Hour
Replicate 13.2721498370204
Replicate 23.0184240228203
Replicate 32.8759476927356
Condition 3: 24 Hour
Replicate 115.719069601697
Replicate 212.411134910857
Replicate 314.345871817725


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_83981.p1 GENE.S_Transcript_83981~~S_Transcript_83981.p1 ORF type:complete len:378 (+),score=17.37,zf-RING_2|PF13639.2|4.1e-13,zf-RING_11|PF17123.1|2e-10,zf-RING_11|PF17123.1|4.5e+03,zf-rbx1|PF12678.3|1.9e-07,zf-C3HC4|PF00097.21|1.9e-06 S_Transcript_83981:337-1470(+)
ATGCCTGGCCAGAGCAACTGCTATGGCACATCTATCACCTTATTGGGCCTGAGCCTGCTGGTTTTATTTCCAACGATTGTTATGGCCCAGCAGCAAACACCTCCGGGAGAAACACCAGGAGGAAGTTACAGCGCACCCATGGCAACGGTGCTTATCGTTTTGATTGTTGTCTTTTTCTTGGTGGGCCTCGTTTCTATCTACCTCAGGCACTTTGCATGGTGCCTAGGATACGAAACTCCAGGCGGCGGTGGCGGCGGCGCGTGGAGAAGACAGGAGGCGCGTGGGCTTGACCCTGCAATACTCGAGTCATTCCCCACCTTCCTTTACTCCGACGTGAAACAGCACCGTATAGGCAAAGGCACGCTAGAATGCGCCGTGTGCATAAACGAGTTCGAGGATGACGAGATTTTGCGGCTCTTACCTGGATGCAGCCACGTGTTCCATCCTGATTGCATCAGACCCTGGCTGTCCTCCCACGTCACTTGCCCCGTATGCAGGGCAAACCTGGAAGATCAACACAACAGTCAGTTTGATTCAGTGTTACAACAGCTCAACCACCAACCATCTGAAGAAGAATCAGAACCGTCCATTCATCAAATCAACGATGAAGTAATCTTTGGGATTAGACCATCGCCTGACGTCATCAAGAGTCCAGTCCAGGAGATTAAAGCTGGGGGTGCTCGTATGGGAAAATTGCCAAGGTCACATTCAACGGGGCATTCATTAATTGATGATTGTGAGAGGTTCACACTAAGGTTACCCGAAGAGGTACGCAACAAATTGGTAAATACCACTCCCAATTTTTGTACGTTGCCTTCTATGGTTAGTCCCAGAATTGGGTTCCGGGCTAGGAGTGTTGGGTGTACAGGTATGCCAATCAAACCGGACCGATGGCGGTTTTCTGTGAGTCCACCATTTATATCTAAACCCGGTTCAACATTGTCATCTAAATCTGATGGTGGTGGTAACATTACTCCTCAGACCGGGATCATGAGCGGTCCAAGGAATTTATTAAAGTCGATTAAATCGCCACTGAATCCAGTTAGTCGTACAAGTGACATAGGTGAAAGATCATCGGATAGACTTTGGCCAAGCCGGCCGTCTCAATACTTGGAATTGGAAACTCAACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_83981.p1 GENE.S_Transcript_83981~~S_Transcript_83981.p1 ORF type:complete len:378 (+),score=17.37,zf-RING_2|PF13639.2|4.1e-13,zf-RING_11|PF17123.1|2e-10,zf-RING_11|PF17123.1|4.5e+03,zf-rbx1|PF12678.3|1.9e-07,zf-C3HC4|PF00097.21|1.9e-06 S_Transcript_83981:337-1470(+)
MPGQSNCYGTSITLLGLSLLVLFPTIVMAQQQTPPGETPGGSYSAPMATVLIVLIVVFFLVGLVSIYLRHFAWCLGYETPGGGGGGAWRRQEARGLDPAILESFPTFLYSDVKQHRIGKGTLECAVCINEFEDDEILRLLPGCSHVFHPDCIRPWLSSHVTCPVCRANLEDQHNSQFDSVLQQLNHQPSEEESEPSIHQINDEVIFGIRPSPDVIKSPVQEIKAGGARMGKLPRSHSTGHSLIDDCERFTLRLPEEVRNKLVNTTPNFCTLPSMVSPRIGFRARSVGCTGMPIKPDRWRFSVSPPFISKPGSTLSSKSDGGGNITPQTGIMSGPRNLLKSIKSPLNPVSRTSDIGERSSDRLWPSRPSQYLELETQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST