Transcript Information: S_Transcript_84046.p1


Annotated TAIR IDAT5G60990.1
Annotated Gene NameDEA(D/H)-box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24546601-24549148 | Reverse length=456
E-Value3.5E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.776892949028
Replicate 217.938439257349
Replicate 317.321218348787
Condition 2: 8 Hour
Replicate 123.00644586015
Replicate 222.8253320581
Replicate 322.516064249406
Condition 3: 24 Hour
Replicate 112.595248138721
Replicate 213.220556752869
Replicate 313.974375954186


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84046.p1 GENE.S_Transcript_84046~~S_Transcript_84046.p1 ORF type:complete len:444 (+),score=93.22,DEAD|PF00270.25|8.9e-48,DEAD|PF00270.25|5.6e+03,Helicase_C|PF00271.27|1.3e+03,Helicase_C|PF00271.27|9.8e+02,Helicase_C|PF00271.27|2.8e-28,Helicase_C|PF00271.27|2.6e+03,ERCC3_RAD25_C|PF16203.1|1.5e-05 S_Transcript_84046:185-1516(+)
ATGGAGGAAGAAAACAGACCAGAAGAAGTGAAATCATTCAAAGAGCTAGGACTATCCGACTCCTTAGTTGAAGCTTGTGAAAGATTAAAATGGACTGCCCCTACCAAAATTCAAGCGGAAGTCTTGCCCCATGCTTTTGAAGGAAAGGATGTAATAGGGCTTGCTCAAACTGGGTCTGGTAAAACTGGGGCGTTTGCCTTGCCAATTATTCAGGCACTATTGGATTGCAATCAGCCGTTTTTTGCTCTAGTTCTTTCTCCCACCAGGGAGCTCGCGCTTCAAATTTCTGAACAATTTGAGGCTTTGGGTGCTGATATCGGCTTAAGAATTGCATCGCTTGTTGGTGGAATAGATTTGAATCAACAACAAATTGCCCTTGGAAGACGGCCTCACATCATAGTTGGAACACCTGGGCGTCTAATGGATCACTTGACTAATACCAAGGGATTTTCACTTCGTGCTCTGAAATATCTGGTGCTGGATGAGGCTGACAAATTGCTGAACTTGGAGTTTGAGAAGGCAATTAATGATATTCTAAAAGTTATCCCCCTTGAGCGAAAGACATATTTGTTTTCTGCCACTATGACAAACAAGGTTAAGAAACTCCAGAGGGCTTGTTTAAGGAATCCCGCAAGGATTGAGGCAGCTTCTAAATATTCAACAGTTGACACATTGAAGCAGCAGTTTTGTTTTATTCCCGCTAAATACAAGGATTGCTACCTTGTATATATTCTAACGGAGATGTCTGGAAGTACATCAATGGTTTTTACTCGCACATGTGAAGCAACCCGTCTTTTGGCACTGATGCTCCGCAATCTCGGTTTAAGGGCTATTGCGATTAGTGGCCAAATGAGCCAGCCTAAAAGACTTGGAGCCTTGAACAAGTTCAAAGCTGGAGAATGTAATGTCCTTATCTGCACTGACGTAGCCAGCAGAGGCCTTGATATTCCTTCTGTGGATATGGTCATAAATTATGACATCCCGTCTAATTCTAAGGATTACATACATCGGGTTGGGAGAACAGCTCGTGCTGGGAGGTCGGGTGTTGCCATCTCATTAATAAATCAATACGAGGTGGAGTGGTTCCAGCAGATAGAGACCCTGATAGGGAAAAAATTAGATAAGTACCCTGTTGAGGAGGAGGAAGTTTTGCTTTTGATGGAACGTGTGACTGAGGCAAAGAGGATTTCACATATGCTGCATTTGCAGAAACTCAAGGAGTCTGGTGGAAAGAAGAGAAGGAAGGAGATGGGCGATGATGATGCAGAGGAGATTGAGAAGTACTTGGGCCATAAAAAAAGTGGCAAAAGTTCCAAGAAAATGAGAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84046.p1 GENE.S_Transcript_84046~~S_Transcript_84046.p1 ORF type:complete len:444 (+),score=93.22,DEAD|PF00270.25|8.9e-48,DEAD|PF00270.25|5.6e+03,Helicase_C|PF00271.27|1.3e+03,Helicase_C|PF00271.27|9.8e+02,Helicase_C|PF00271.27|2.8e-28,Helicase_C|PF00271.27|2.6e+03,ERCC3_RAD25_C|PF16203.1|1.5e-05 S_Transcript_84046:185-1516(+)
MEEENRPEEVKSFKELGLSDSLVEACERLKWTAPTKIQAEVLPHAFEGKDVIGLAQTGSGKTGAFALPIIQALLDCNQPFFALVLSPTRELALQISEQFEALGADIGLRIASLVGGIDLNQQQIALGRRPHIIVGTPGRLMDHLTNTKGFSLRALKYLVLDEADKLLNLEFEKAINDILKVIPLERKTYLFSATMTNKVKKLQRACLRNPARIEAASKYSTVDTLKQQFCFIPAKYKDCYLVYILTEMSGSTSMVFTRTCEATRLLALMLRNLGLRAIAISGQMSQPKRLGALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLINQYEVEWFQQIETLIGKKLDKYPVEEEEVLLLMERVTEAKRISHMLHLQKLKESGGKKRRKEMGDDDAEEIEKYLGHKKSGKSSKKMRK*

Click here to download the sequence:
Link to NCBI Protein BLAST