Transcript Information: S_Transcript_84054.p1


Annotated TAIR IDAT5G54250.1
Annotated Gene Namecyclic nucleotide-gated cation channel 4
Annotated Gene Symbol(s)ATCNGC4, CNGC4, HLM1, DND2
Annotation TypeOrtholog
Chromosome Positionchr5:22025684-22029971 | Reverse length=694
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6462597600296
Replicate 210.051528766891
Replicate 36.9490538538495
Condition 2: 8 Hour
Replicate 115.42882823804
Replicate 213.301314019322
Replicate 315.635693372135
Condition 3: 24 Hour
Replicate 110.82855256124
Replicate 210.552634329961
Replicate 315.935417740195


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84054.p1 GENE.S_Transcript_84054~~S_Transcript_84054.p1 ORF type:complete len:698 (+),score=94.23,Ion_trans|PF00520.27|4.2e-08 S_Transcript_84054:118-2211(+)
ATGACAAGTAACCAAGAAATTTCGTTGGTCTCACATTTTTATGATACTAGAAGTGATGGTTCACAAGAAGAGGAGGAAGAAGAAGATGATGATGAAGAAGAAGAATTAAGATTACAATCAAAATACAAGAAGGAAGAGCAAGAAGACGATGATTTTGGTTCCTGGTATTGCTGGGGCGCTCTCCACAAGCTATGTGGAGGGGATACCAGCAATACCAGTCGGAGAGGATGGAAAGGGGGGATTTACTCATTTGCCCTCGGGGGAGTTCTGGACCCGAGGGCAACATGGGTACATGAGTGGAATAGGATCTTCCTCCTCGTCTGTGCCACCGGGCTTTTTGTAGATCCCCTCTTCTTCTATGCACTCTCAATAAGTGAGGCTTACCTTAGCTTGTTTGTCGACGGGTGGTTCGCCATCACGGTCTCAGTCCTCCGTTGCATGACGGATGCACTTCAGTTGTGGAATATGTGGCTTCAACTCAAGATGGCTAACCACCCTTTTGTGGCTAAGGTGGGTTCGGATAGTGAGGCTAGTGGTTTGGTGGCTCTTAGACACTTGAAGGCTAGGAAATGCCTCTTGTTTGATGTCTTTGTGATCCTCCCTCTACCCCAGATAGTGTTATGGGTGGTGATTCCAAATCTACTAAGAAGAGGATTAACAAATGAAGTGATGACAGTCTTCTTGTTAATGTTTCTATTTCAATACCTCCCTAAGATCTACCATTCGGTTTGCCTCTTACGTCGCATGCAGAAGCTCTCTGGCTACGTCTTTGGTACTGTTTGGTGGGGTTTCGCCCTCAACATGATCGCCTATTTTGTTGCCTCTCATGCAGCAGGGGCATGTTGGTATTTGCTAGGAATCCAGAGGGCAACAAAGTGTCTAAGGGAGCAATGCAATGAAATGCATGGGTGCATCCCAAAATTATTAGCCTCCCAAGAACCAATATATTATGGTACAAGAAGTATGATCAAAGATCACTATCGCCTTCTCTGGGCTTCAAATACAGCAGCAAGGACCAACTGCTTGAAGAGTTATGATAACTATGAATATGGAGCTTATAAATGGGTCATTTATCTTGTTAGCAACAATAGCCGTCTTGAGAAAATACTCATGCCCATCTTTTGGGGCCTTATGACTATGAGTACATTTGGGAACTTGGAGAGTACGGAAGAATGGCTAGAATCTCTGTTTGTAATCATTGTCTTAACAAGTGGCCTCCTTCTTGTCACCATGTTGATCGGTAACATCAAGGTGTTCTTGCATGCAACAACATCAAAGAAGCAGGCTATGCAGCTAAGGATGAGGAACATAGAGTGGTGGATGCGTAAGAGGAACTTGCCTCCTGCGCTGAAGCAAAGGGTCCGAAACTATGAATGGCAACGTTGGGCAGCAATGCGAGGGGTTGATGAATGTGAGATGATCAGGAACCTTCCTGAAGGGCTTAGGAGGGACATCAAGTACCATCTATGTCTCGACTTGGTTAAGCAGGTACCATTATTCCAGCATATGGATGATCTAGTACTGGAAAACATATGTGACCGTGTCAAGTCCCTGATTTTCACCAAGGGAGAAACGATCACGATAGAGGGTGATCCAGTTCGAAGAATGCTCTTTGTGGTAAGAGGCCACCTTCAAAGCAGCCAAGAACTCAGAGATGGAGTCAAGAGCTGCTGTATGTTAGGCCCTGGAAACTTCAGCGGTGATGAGCTCTTATCATGGTGTTTAAGAAGACCATTTATAGAGAGGTTACCACCTTCATCCTCGAACTTGATCACACTCGAGACCACAGAAGCATTCGGGCTAGAAGCTGAGGATGTAAAGTATGTGACTCAGCATTTTCGATACACATTTGTCAACGAAAAGGTTAGGAGAAGCGCGAGGTATTACTCTCCAGGGTGGAGGACTTGGGCTGCTGTTGCCATTCAGTTGGCTTGGAGAAGGTATAAGCATCGCTTGACACTTACATCGCTCTCCTTCATCCGACCCAGGAGGCCTTTGTCTAGGAGTTCTTCACTTGGTGAGGATAGGTTGAGGCTTTATACAGCCCTTCTGACATCTCCTAAGCCTAATCACGACGATTTTGATGCATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84054.p1 GENE.S_Transcript_84054~~S_Transcript_84054.p1 ORF type:complete len:698 (+),score=94.23,Ion_trans|PF00520.27|4.2e-08 S_Transcript_84054:118-2211(+)
MTSNQEISLVSHFYDTRSDGSQEEEEEEDDDEEEELRLQSKYKKEEQEDDDFGSWYCWGALHKLCGGDTSNTSRRGWKGGIYSFALGGVLDPRATWVHEWNRIFLLVCATGLFVDPLFFYALSISEAYLSLFVDGWFAITVSVLRCMTDALQLWNMWLQLKMANHPFVAKVGSDSEASGLVALRHLKARKCLLFDVFVILPLPQIVLWVVIPNLLRRGLTNEVMTVFLLMFLFQYLPKIYHSVCLLRRMQKLSGYVFGTVWWGFALNMIAYFVASHAAGACWYLLGIQRATKCLREQCNEMHGCIPKLLASQEPIYYGTRSMIKDHYRLLWASNTAARTNCLKSYDNYEYGAYKWVIYLVSNNSRLEKILMPIFWGLMTMSTFGNLESTEEWLESLFVIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLRMRNIEWWMRKRNLPPALKQRVRNYEWQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVKQVPLFQHMDDLVLENICDRVKSLIFTKGETITIEGDPVRRMLFVVRGHLQSSQELRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSNLITLETTEAFGLEAEDVKYVTQHFRYTFVNEKVRRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRSSSLGEDRLRLYTALLTSPKPNHDDFDAF*

Click here to download the sequence:
Link to NCBI Protein BLAST