Transcript Information: S_Transcript_84213.p1


Annotated TAIR IDAT3G22320.1
Annotated Gene NameEukaryotic rpb5 RNA polymerase subunit family protein
Annotated Gene Symbol(s)ATRPABC24.3, RPB5A, NRPB5, NRPD5
Annotation TypeOrtholog
Chromosome Positionchr3:7891045-7892094 | Reverse length=205
E-Value3.9E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.568698277678
Replicate 242.313659199678
Replicate 345.884101850504
Condition 2: 8 Hour
Replicate 141.414526123128
Replicate 245.176003533361
Replicate 345.720948486047
Condition 3: 24 Hour
Replicate 138.729817589604
Replicate 238.320454356143
Replicate 343.377042551794


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84213.p1 GENE.S_Transcript_84213~~S_Transcript_84213.p1 ORF type:complete len:207 (+),score=37.45,RNA_pol_Rpb5_C|PF01191.15|4.6e-36,RNA_pol_Rpb5_N|PF03871.10|1e-32 S_Transcript_84213:111-731(+)
ATGGCCACCTCAGATGACGAGATAAATCGACTATATAGAATCCAAAGAACAATTATGCAAATGCTTAACGACAGAAGTTATGTTGTAGCAGATCATGAGCTCAACATGACCAAGCAGCAATTCATTAATAAATATGGTGAGTACACGAAGAGGGATGCCCTTTCTATTCAAAAGGCTAGACGCAATGACAGCTCTGACCAGATATATGTTTTCTTTCCCGAAGAGGCTAAGGTTGGTGTTAAGACAATCAAGAATTACGCCAATATTATGAAGAATGAAAATGTAATTCGAGCAATTTTGGTGGTTCAACAGAACTTGACTCCCTTTGCTAAGACTTGCATCAGCGAGTTATCACCTAAATTCCACTTGGAGGTTTTTCAGGAGGCAGAGCTCTTGGTTAATATTAAGGAGCATGTTCTTGTTCCTGAGCATCAGTTGCTAACAGATGAAGAAAAGAAGACCCTACTGCAGAGGTACACAGTGAAAGAAACACAGCTACCAAGAATTCAGATGACTGATCCTGTTGCAAGGTATTATGGACTTAAACGAGGACAAGTTGTGAAGATTATTAGGCCTAGTGAGACTGCAGGAAGATATGTAACTTATCGATATGTTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84213.p1 GENE.S_Transcript_84213~~S_Transcript_84213.p1 ORF type:complete len:207 (+),score=37.45,RNA_pol_Rpb5_C|PF01191.15|4.6e-36,RNA_pol_Rpb5_N|PF03871.10|1e-32 S_Transcript_84213:111-731(+)
MATSDDEINRLYRIQRTIMQMLNDRSYVVADHELNMTKQQFINKYGEYTKRDALSIQKARRNDSSDQIYVFFPEEAKVGVKTIKNYANIMKNENVIRAILVVQQNLTPFAKTCISELSPKFHLEVFQEAELLVNIKEHVLVPEHQLLTDEEKKTLLQRYTVKETQLPRIQMTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV*

Click here to download the sequence:
Link to NCBI Protein BLAST