Transcript Information: S_Transcript_84217.p2


Annotated TAIR IDAT3G22320.1
Annotated Gene NameEukaryotic rpb5 RNA polymerase subunit family protein
Annotated Gene Symbol(s)ATRPABC24.3, RPB5A, NRPB5, NRPD5
Annotation TypeOrtholog
Chromosome Positionchr3:7891045-7892094 | Reverse length=205
E-Value1.5E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2444699836899
Replicate 21.0632669666272
Replicate 31.7776131164916
Condition 2: 8 Hour
Replicate 13.0831889615132
Replicate 22.9649437956264
Replicate 31.5409046461432
Condition 3: 24 Hour
Replicate 11.3159568367828
Replicate 21.9114057955956
Replicate 31.5194002653684


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84217.p2 GENE.S_Transcript_84217~~S_Transcript_84217.p2 ORF type:complete len:83 (+),score=4.78,RNA_pol_Rpb5_N|PF03871.10|1.3e-20 S_Transcript_84217:66-314(+)
ATGGCCACCTCAGATGACGAGATAAATCGACTATATAGAATCCAAAGAACAATTATGCAAATGCTTAATGATAGAAGTTATGTTGTAGCAGATCATGAGCTCAACATGACCAGGCAGCGATTCATTAATAAATATGGTGAGCACACGAAGAGGGATGCCCTTTCTATTCAAAAGGCTAAACGCAATGACAGCTCTGACCAGAGGCCAAAGTTGGTGTTAAGACTATCAAGAATTACGCCAATATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84217.p2 GENE.S_Transcript_84217~~S_Transcript_84217.p2 ORF type:complete len:83 (+),score=4.78,RNA_pol_Rpb5_N|PF03871.10|1.3e-20 S_Transcript_84217:66-314(+)
MATSDDEINRLYRIQRTIMQMLNDRSYVVADHELNMTRQRFINKYGEHTKRDALSIQKAKRNDSSDQRPKLVLRLSRITPIL*

Click here to download the sequence:
Link to NCBI Protein BLAST