Transcript Information: S_Transcript_84249.p1


Annotated TAIR IDAT3G02490.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:513607-515604 | Forward length=665
E-Value7.8E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.200578263113
Replicate 216.193189831728
Replicate 315.325653928626
Condition 2: 8 Hour
Replicate 113.783076996832
Replicate 213.234051308007
Replicate 312.876239711303
Condition 3: 24 Hour
Replicate 112.512092891326
Replicate 214.151581876311
Replicate 311.446624221414


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84249.p1 GENE.S_Transcript_84249~~S_Transcript_84249.p1 ORF type:complete len:639 (+),score=140.03,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.9,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|0.00084,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|60,PPR_2|PF13041.2|1.1e+03,PPR|PF01535.16|0.044,PPR|PF01535.16|0.78,PPR|PF01535.16|9.1e+02,PPR|PF01535.16|2.5,PPR|PF01535.16|6.2e+03,PPR|PF01535.16|0.0034,PPR|PF01535.16|1.1,PPR|PF01535.16|11,PPR|PF01535.16|85,PPR|PF01535.16|31,PPR|PF01535.16|1.3e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|51,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|1.1e+04 S_Transcript_84249:111-2027(+)
ATGAGAAATCAATGGCGTCTCCTCCTTCGTCACCACCAAAGGCACCAAATTTCGTCACCTTCCAACATTTCACAGCCCATTTCTTTCCACTGTAACCAGGTAAAAACCTTCACTTTATCATCCCATGTTATTCCAAGAAACCCAACTTTTAACCCTCTTTTACTTCGTTATTTCTCTTCTGACACTCCTATTGAAGAAAAACCATCTGGGCATCCACTATTACTTGATATCTTCTCTAAAGCACTGACTAATGACAAGATTATGCAACAAATTGAATCTAACAATGTTGTTATTAGCCATGATTTGGTCCTAAGTGTACTTAAAGATCTGGGTTCTAATCCCAGTACTGGTATTAAGTTCTTTGATTGGGTTTTGGAGAGGGAGAGTGAGAGATTGAGCTCAAAGTCATATAATTTGATGTTAAAAATTCTGGGTAATAATGGGTTTGTTAAGGAGTTTTGGGATATGGTTGGTGCTATGAAGAAAAAGGGTTATGGGGTTTCAAAGGGGACTTTTATCGAGGTCTCAAAAAAGTTCGAGAAGGACGGATTGCGAGGCGATTTGGAGAAGTTGAAGGGGTTGTTTGAGAAGGATGTTGATGGGGATTGTACCAGGGTGAGCAAGATTGTTAGCAAAAATGTTTGGGATGATGTGGTTGAGAAGGAGTTAAGTGAATTGGGTGTTACTTATTCTAGTGAATTGGTTAAGATGGTGTTGGAGAAGCTTAGTAAAGATCCTTTGAAGGGTTTGATCTTTTTTAGGTGGGTCGAGGAGAGCGGTGTTTTTAAACATGATAAGCGAAGTTATAATGCTATGTTGTTGGTTTTGGGTAGGGAGGATTGTATTGATAGGTTTTGGAATGTTGTTGGTGAAATGAAAGATGCAGGACATGAGATGGAGGTGGACACTTTTATTGAGGTTTTGGTTAGATTCATAAAGAGGAAGATGTTGAAGGAGGCAGTTAGGCTGTATGAGTTTGTGATGGATGGGGTGAACAAGCCTTCTAGGCAAGATTGTACTTTACTTTTAAGGAAAATAGTCGTTGCGAAGGATCTTGACATGGAGTTGTTTTGTAGAGTTGTTAAGGCGTTTACGGAGAAGGGTCTTGCCTTGGATGACTCTATGCTGGATGCTGTTCTCAAATCGTTGACTAGCGTTGGTAGGATGAAGGAGTGTAATAAGGTCTTGGAAGTTATGCTCGAAAGTGGGTACAGACCTAGTGGGGCTATGCAAGCTAGGTTTGCATTTGATCTAAGTAGTTCTAGAATGAAAAATGAAGCAGATGAGTTTATTCAGAAATTAGAGGCTTCTGGCTTAACCCCAGATTACAAGACATGGGGGTGTTTGATCGAAGGATACTGTGTAGCTGGTGATCTTAAGAAAGCCAGTAACTGCTTGCAAAAGCTGGCTGAAAGTGATGGTTTCTCATCGGCTGGATATTCGTTGGATATGTTGGTCAATGCTTACTGCACTAGAGATCGACCTCTCGAAGCATGCAAGATTCTCTCTGATCTTGTCAGCAGAGGGGATCTAAAGCCATGGCATACGACTTACAAGGTGCTTATTAGCAAGCTTCTTGTTCAAAAATGTTTCAAAGATGCCTTGGGCCTGCTTGGTCCGATGAAGGATCATGGGTTTCCTCCTTTCTTGGATCCATTCATTGCATATTTTTCAAGGAGAGGAACAGCTGATGAAGCCATGCTATTTTTCAAGGCAATGACTGTGAAAAGCTTTCCGTCTACTAGTGTTTTTCTTCGGGTTTTTGAAGCCTTCTCAAAGGCTGGAAGACCCGAGGATGCTCAGAACTTACTGGCTAAATGCCCGCAATACATCAGAAATCATGCAGATGTTCTGAATTACTTTTATTCCATGAAGTCTGAAAAATCTGTTGAACCAGCTGCTGCTGTATCTGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84249.p1 GENE.S_Transcript_84249~~S_Transcript_84249.p1 ORF type:complete len:639 (+),score=140.03,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.9,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|0.00084,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|60,PPR_2|PF13041.2|1.1e+03,PPR|PF01535.16|0.044,PPR|PF01535.16|0.78,PPR|PF01535.16|9.1e+02,PPR|PF01535.16|2.5,PPR|PF01535.16|6.2e+03,PPR|PF01535.16|0.0034,PPR|PF01535.16|1.1,PPR|PF01535.16|11,PPR|PF01535.16|85,PPR|PF01535.16|31,PPR|PF01535.16|1.3e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|51,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|1.1e+04 S_Transcript_84249:111-2027(+)
MRNQWRLLLRHHQRHQISSPSNISQPISFHCNQVKTFTLSSHVIPRNPTFNPLLLRYFSSDTPIEEKPSGHPLLLDIFSKALTNDKIMQQIESNNVVISHDLVLSVLKDLGSNPSTGIKFFDWVLERESERLSSKSYNLMLKILGNNGFVKEFWDMVGAMKKKGYGVSKGTFIEVSKKFEKDGLRGDLEKLKGLFEKDVDGDCTRVSKIVSKNVWDDVVEKELSELGVTYSSELVKMVLEKLSKDPLKGLIFFRWVEESGVFKHDKRSYNAMLLVLGREDCIDRFWNVVGEMKDAGHEMEVDTFIEVLVRFIKRKMLKEAVRLYEFVMDGVNKPSRQDCTLLLRKIVVAKDLDMELFCRVVKAFTEKGLALDDSMLDAVLKSLTSVGRMKECNKVLEVMLESGYRPSGAMQARFAFDLSSSRMKNEADEFIQKLEASGLTPDYKTWGCLIEGYCVAGDLKKASNCLQKLAESDGFSSAGYSLDMLVNAYCTRDRPLEACKILSDLVSRGDLKPWHTTYKVLISKLLVQKCFKDALGLLGPMKDHGFPPFLDPFIAYFSRRGTADEAMLFFKAMTVKSFPSTSVFLRVFEAFSKAGRPEDAQNLLAKCPQYIRNHADVLNYFYSMKSEKSVEPAAAVSA*

Click here to download the sequence:
Link to NCBI Protein BLAST