Transcript Information: S_Transcript_84318.p2


Annotated TAIR IDATCG00020.1
Annotated Gene Namephotosystem II reaction center protein A
Annotated Gene Symbol(s)PSBA
Annotation TypeOrtholog
Chromosome PositionchrC:383-1444 | Reverse length=353
E-Value7.4E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1431.89743529975
Replicate 2406.04258182827
Replicate 3596.62772211693
Condition 2: 8 Hour
Replicate 1598.55671805377
Replicate 2475.1805930003
Replicate 3816.14406338395
Condition 3: 24 Hour
Replicate 1461.82798882375
Replicate 2413.19841783544
Replicate 3471.16773912721


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84318.p2 GENE.S_Transcript_84318~~S_Transcript_84318.p2 ORF type:complete len:354 (+),score=37.43,Photo_RC|PF00124.15|3.7e-98 S_Transcript_84318:3175-4236(+)
ATGACTGCAATTTTAGAGAGACGCGAAAGCGAAAGCCTATGGGGTCGCTTCTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTATCCAATATGGGAAGCTGCATCCGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGCCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCGTATTCAGCTCCTGTAGCAGCGGCTACTGCTGTTTTCTTGATTTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTCGGCCAAGAGGAAGAAACTTATAATATCGTGGCTGCTCATGGTTATTTTGGTCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCTATCGAAGCTCCATCTACAAATGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84318.p2 GENE.S_Transcript_84318~~S_Transcript_84318.p2 ORF type:complete len:354 (+),score=37.43,Photo_RC|PF00124.15|3.7e-98 S_Transcript_84318:3175-4236(+)
MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG*

Click here to download the sequence:
Link to NCBI Protein BLAST