Transcript Information: S_Transcript_84378.p1


Annotated TAIR IDAT3G23590.1
Annotated Gene NameREF4-related 1
Annotated Gene Symbol(s)RFR1, MED33A
Annotation TypeHomolog
Chromosome Positionchr3:8467638-8473469 | Forward length=1309
E-Value4E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1924590986928
Replicate 26.0823786280135
Replicate 38.9371477939366
Condition 2: 8 Hour
Replicate 112.451983044764
Replicate 214.978412359817
Replicate 313.285905014064
Condition 3: 24 Hour
Replicate 110.473574276312
Replicate 29.0810477891529
Replicate 39.415078219718


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84378.p1 GENE.S_Transcript_84378~~S_Transcript_84378.p1 ORF type:complete len:584 (+),score=117.29 S_Transcript_84378:161-1912(+)
ATGGCAGTGATTGTAGAACAGAAGAGCATCTGGAACAGTGTCCTAGAGCAAACAAAGCATGCCCAAGAAATGGGTAGTGATCCCTTTGTATGGGCAATCCAAATTTCATCAGACCTGAGTTCTTCAGGTGTTTCTTTGCCTTCAACAGAACTTGCCCATGTTTTGGTTTCCTACATTTGTTGGGATAACAATGTTCCTTCATCATGGAAGTTTCTAGAAAGATCCCTTCTCGTTAACATGGTTCCCCCTTTGCTTGTTCTTGCTCTTCTTTCTACAAGGGTCATTCCATGCCGGCATTCTCACCCAGCAGGATATAGGCTTTACATGGAGCTTTTAAAAAGACATGTTTTCACTTTGAAGTCTCAGTTCAATACACCAAATTTCGAAAAAGTTATGATGTCAATAAAGCATGCCCTTCATCTATCTAAGATTTTTGGTCAGACAAGTGAGGCAGGGATTCTTGCGGCTGAATTTGTCTTTATAATTGTGTGGCAGCTACTTGATGCATCACTGGATGATGAAGGATTGTTTGATCTTATCCCAGAAAAGAAATCTATTTGGATAACAAATGTTCAAGAAATGGATATTGACACCTATGATAATTTTTATGAGAAGAGATTTGAACTGCTCGAGAAATTGAAGAGCATGAATACTGTGATGGCAGTTGAGATTATTAACCAATTTTTTCAAAATAATGTTACTTCTAGAATCCTTTCTTTGCTACGCCATAACATGCCTAAACAATGGGGAGAATTTATACAGCGATTGGAGCTGCTCGCAGAAAACTCTTCCGCATTAAAGGACTCAAAGAATATAAATCCCAATGTTCTCTTTCAAGTGGTTTCTAGTGGTCACAAAGTTCCATCCCAGGAGTTCACACGTACTTTGGACGAGTTTTGTGCTGTGACGGCTTCTAGATCTCTGGTTTCTTTTGCTGGATTTTGTAAGGGGACAAGTGACTCTGCTTTGTGGCTTCCTTTAGATATATTTCTAGAAGATTCCATGGATGGATCTCAAGTTACAGCAATAAGTGCAGTTGAAAGCATTACTGGTTTGGTAAAGTCCCTTCATGCAATCAACAATATCTCTTGGCATGATACCTTTCTGGCATTGTGGATTGCTGCTCTCCGCTTTGTTCAAAGGGAGAGGCATCCAATTGAGGGGCCGGTGCCTCGCCTTGATACTCGCATGTGTGTTTTGCTGTCAATCACGACCTTAGTGGTGGCTGATCTGATTGATGAAGAGGAGAATCTACTTGATGAACCAGAATGTATATCCACCAATCATTGGAAAGAGAAAAAAAATCCTGGAAACCGTCGCAAAGATCTGGTGTCCTGCTTACAGATTCTTGGTGATTATGAGACCTTGTTGAAACCACCTCTATCTGTTGTCTCTGCTGCCAATTTGGCTGCTGCAAAAGCAATGATGTTTGTTTCGGGCATTGATGTTGCAAGTGGATATTTTGAATGCATTAATGTCAATGATTTGCCAGTTAACTGTGCTGGAAATATGCGGCACTTAATAGTTGAAGCTTGCATTGCTAGGAATCTACTTGATACATCAGCATACTATTGGCCGGGTTATGTTAATGGTCAGATCAATCAATTTCCTGGTCTTATACCTTCTCAAGTGGCTGGATGGTCATCATTCATGCAGGGAGATCCACTTACACCTATGATGGTTAATGCTATGGTTGCAACTCCTGCTTCAAGGTATACTCATTCCTGGGAAGCTCATACTTTTTTTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84378.p1 GENE.S_Transcript_84378~~S_Transcript_84378.p1 ORF type:complete len:584 (+),score=117.29 S_Transcript_84378:161-1912(+)
MAVIVEQKSIWNSVLEQTKHAQEMGSDPFVWAIQISSDLSSSGVSLPSTELAHVLVSYICWDNNVPSSWKFLERSLLVNMVPPLLVLALLSTRVIPCRHSHPAGYRLYMELLKRHVFTLKSQFNTPNFEKVMMSIKHALHLSKIFGQTSEAGILAAEFVFIIVWQLLDASLDDEGLFDLIPEKKSIWITNVQEMDIDTYDNFYEKRFELLEKLKSMNTVMAVEIINQFFQNNVTSRILSLLRHNMPKQWGEFIQRLELLAENSSALKDSKNINPNVLFQVVSSGHKVPSQEFTRTLDEFCAVTASRSLVSFAGFCKGTSDSALWLPLDIFLEDSMDGSQVTAISAVESITGLVKSLHAINNISWHDTFLALWIAALRFVQRERHPIEGPVPRLDTRMCVLLSITTLVVADLIDEEENLLDEPECISTNHWKEKKNPGNRRKDLVSCLQILGDYETLLKPPLSVVSAANLAAAKAMMFVSGIDVASGYFECINVNDLPVNCAGNMRHLIVEACIARNLLDTSAYYWPGYVNGQINQFPGLIPSQVAGWSSFMQGDPLTPMMVNAMVATPASRYTHSWEAHTFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST