Transcript Information: S_Transcript_84383.p1


Annotated TAIR IDAT3G23590.1
Annotated Gene NameREF4-related 1
Annotated Gene Symbol(s)RFR1, MED33A
Annotation TypeOrtholog
Chromosome Positionchr3:8467638-8473469 | Forward length=1309
E-Value5.4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2650546361793
Replicate 22.0198328468147
Replicate 31.9157067410782
Condition 2: 8 Hour
Replicate 13.5292019186805
Replicate 23.6236092867163
Replicate 33.9779574755775
Condition 3: 24 Hour
Replicate 12.9998255497647
Replicate 22.8329764470434
Replicate 31.1989352093981


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84383.p1 GENE.S_Transcript_84383~~S_Transcript_84383.p1 ORF type:complete len:568 (+),score=105.24 S_Transcript_84383:72-1706(+)
ATGGCAGTGATTGTAGAACAGAAGAGCATCTGGAACAGTGTCCTAGAGCAAACAAAGCATGCCCAAGAAATGGGTAGTGATCCCTTTTTATGGGCAGTCCAAATTTCATCAGAACTGAGTTCTTCAGGTGTCTCTTTGCCTTCAACAGAACTTGCCCATGTTTTGGTTTCCTACATTTGTTGGGATAACAATGTTCCTTCATCATGGAAGTTTCTAGAAAGATCCCTTCTCGTTAACATGGTTCCCCCTTTGCTTGTTCTTGCTCTTCTTTCTACAAGGGTCATTCCATGCCGGCATTCTCACCCAGCAGGATATAGGCTTTACATGGAGCTTTTAAAAAGACATGTTTTCACTTTGAAGTCTCAGTTCAATACACCAAATTTCGGAAAAGTTATGATGTCAATAGAGCATGCCCTTCATCTATCTCAGATTTTTGGTCAGACAAGTGAGGCAGGGATTCTTGCGGCTGAATTTGTCTTTATAATTGTGTGGCAGCTACTTGATGCATCACTGGATGATGAAGGATTGTTTGATCTTATCCCAGAAAAGAAATCTATTTGGATAACAAATGTTCAAGAAATGGATATTGACACCTATGATAATTTTTATGAGAAGAGATTTGAACTGCTCGAGAAATTGAAGAGCATGAATACTGTGATGGCAGTTGAGATTATTAACCAATTTTTTCAAAATAATGTTACTTCTAGAATCCTTTCTTTGCTACGCCATAACATGCCTAAACAATGGGGAGAATTTATACAGCGATTGGAGCTGCTCGCAGAAAACTCTTCCGCATTAAAGGACTCAAAGAATATAAATCCCAATGTTCTCTTTCAAGTGGTTTCTAGTGGTCACAAAGTTCCATCCCAGGAGTTCACACGTACTTTGGACGAGTTTTGTGCTGTGACGGCTTCTAGATCTCTGGTTTCTTTTGCTGGATTTTGTAAGGGGACAAGTGACTCTGCTTTGTGGCTTCCTTTAGATATATTTCTAGAAGATTCCATGGATGGATCTCAAGTTACAGCAATAAGTGCAGTTGAAAGCATTACTGGTTTGGTAAAGTCCCTTCATGCAATCAACAATATCTCTTGGCATGATACCTTTCTGGCATTGTGGATTGCTGCTCTCCGCTTTGTTCAAAGGGAGAGGCATCCAATTGAGGGGCCGGTGCCTCGCCTTGATACTCGCATGTGTGTTTTGCTGTCAATCACGACCTTAGTGGTGGCTGATCTGATTGATGAAGAGGAGAATCTACTTGATGAACCAGAATGTATATCCACCAATCATTGGAAAGAGAAAAAAAATCCTGGAAACCGTCGCAAAGATCTGGTGTCCTGCTTACAGATTCTTGGTGATTATGAGACCTTGTTGAAACCACCTCTATCTGTTGTCTCTGCTGCCAATTTGGCTGCTGCAAAAGCAATGATGTTTGTTTCGGGCATTGATGTTGCAAGTGGATATTTTGAATGCATTAATGTCAATGATTTGCCAGTTAACTGTGGAATCTACTTGATACATCAGCATACTATTGGCCGGGTTATGTTAATGGTCAGATCAATCAATTTCCTGGTCTTATACCTTCTCAAGTGGCTGGATGGTCATCATTCATGCAGGGAGATCCACTTACACCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84383.p1 GENE.S_Transcript_84383~~S_Transcript_84383.p1 ORF type:complete len:568 (+),score=105.24 S_Transcript_84383:72-1706(+)
MAVIVEQKSIWNSVLEQTKHAQEMGSDPFLWAVQISSELSSSGVSLPSTELAHVLVSYICWDNNVPSSWKFLERSLLVNMVPPLLVLALLSTRVIPCRHSHPAGYRLYMELLKRHVFTLKSQFNTPNFGKVMMSIEHALHLSQIFGQTSEAGILAAEFVFIIVWQLLDASLDDEGLFDLIPEKKSIWITNVQEMDIDTYDNFYEKRFELLEKLKSMNTVMAVEIINQFFQNNVTSRILSLLRHNMPKQWGEFIQRLELLAENSSALKDSKNINPNVLFQVVSSGHKVPSQEFTRTLDEFCAVTASRSLVSFAGFCKGTSDSALWLPLDIFLEDSMDGSQVTAISAVESITGLVKSLHAINNISWHDTFLALWIAALRFVQRERHPIEGPVPRLDTRMCVLLSITTLVVADLIDEEENLLDEPECISTNHWKEKKNPGNRRKDLVSCLQILGDYETLLKPPLSVVSAANLAAAKAMMFVSGIDVASGYFECINVNDLPVNCGIYLIHQHTIGRVMLMVRSINFLVLYLLKWLDGHHSCREIHLHL*

Click here to download the sequence:
Link to NCBI Protein BLAST