Transcript Information: S_Transcript_84507.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value1.7E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.389888843229
Replicate 220.619429493004
Replicate 328.784457251975
Condition 2: 8 Hour
Replicate 115.346308919806
Replicate 213.172209946755
Replicate 312.948879386204
Condition 3: 24 Hour
Replicate 127.357143810651
Replicate 229.229962593794
Replicate 323.8077241581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84507.p1 GENE.S_Transcript_84507~~S_Transcript_84507.p1 ORF type:internal len:107 (-),score=22.39,Transketolase_C|PF02780.16|3.3e-24 S_Transcript_84507:1-318(-)
CTCGGTGTATTCTCACATGGAAATCGGCATCGAGTTGGACAGATTGGGAAGGGTCGAATTTTGATAGAGGGAGAGAGAGTTGCACTACTAGGCTATGGATCAGCAGTTCAGAACTGTTTGGCTGCAGCAGCTTTGGTTGAAACCCGTGCCTTACGTGTGACTGTAGCAGATGCCCGTTTCTGTAAACCATTAGATCATGCACTTATCCGTAGTCTTGCAAAGTCACATGAGGTTCTAATTACAGTGGAAGAAGGATCAATTGGAGGTTTTGGTTCTCATGTTGCTCAATTCATGGCTCTTGATGGTCTTCTAGATGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84507.p1 GENE.S_Transcript_84507~~S_Transcript_84507.p1 ORF type:internal len:107 (-),score=22.39,Transketolase_C|PF02780.16|3.3e-24 S_Transcript_84507:1-318(-)
LGVFSHGNRHRVGQIGKGRILIEGERVALLGYGSAVQNCLAAAALVETRALRVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDG

Click here to download the sequence:
Link to NCBI Protein BLAST