Transcript Information: S_Transcript_84508.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value3.4E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.959028406783
Replicate 210.309714746502
Replicate 312.410065402049
Condition 2: 8 Hour
Replicate 16.5769895370597
Replicate 27.3178944148638
Replicate 38.3669682187777
Condition 3: 24 Hour
Replicate 116.128465380906
Replicate 214.614981296897
Replicate 316.736122923021


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84508.p1 GENE.S_Transcript_84508~~S_Transcript_84508.p1 ORF type:5prime_partial len:107 (-),score=22.29,Transket_pyr|PF02779.20|4.6e-30 S_Transcript_84508:12-332(-)
CCATCTAGGTGCTTTGATGTTGGAATAGCTGAACAACATGCAGTAACTTTTGCTGCTGGATTAGCTTGTGAAGGTCTTAAACCATTTTGTGCAATATACTCATCTTTCATGCAAAGGGCATATGATCAGGTAGTGCATGATGTAGATTTACAAAAGCTACCAGTGAGGTTTGCTATGGACAGAGCAGGTTTGGTAGGAGCTGATGGTCCTACTCATTGTGGCTCATTTGATGTAACATTTATGGCTTGCCTTCCAAATATGATAGTAATGGCCCCGTCAGATGAGGCAGAACTTTTCCAGATCGGAAGAGAAGACGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84508.p1 GENE.S_Transcript_84508~~S_Transcript_84508.p1 ORF type:5prime_partial len:107 (-),score=22.29,Transket_pyr|PF02779.20|4.6e-30 S_Transcript_84508:12-332(-)
PSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMIVMAPSDEAELFQIGREDV*

Click here to download the sequence:
Link to NCBI Protein BLAST