Transcript Information: S_Transcript_84540.p1


Annotated TAIR IDAT4G37920.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17828538-17830317 | Reverse length=427
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27295385882236
Replicate 20.67885506330815
Replicate 31.3240938726688
Condition 2: 8 Hour
Replicate 13.8276341594854
Replicate 25.3921891593187
Replicate 32.1862407799981
Condition 3: 24 Hour
Replicate 10.22405008708302
Replicate 20.5811233737525
Replicate 30.7760629047728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84540.p1 GENE.S_Transcript_84540~~S_Transcript_84540.p1 ORF type:complete len:195 (+),score=35.84 S_Transcript_84540:91-675(+)
ATGAGCACCAACATCTTCACTGTACAATTATCAACATCTTCCTCTCTCACCAACGATCTTCTCCTTCCCTACAATCTCTCATCACCACTTCCCCAGCTTCCTTCTTGTTCTCCTTTTTCAAATTTCCAACCCCTTAAACCCACAAGAACACCTCATAATCTCAAGCCTACTTGGACCCTTTCCAACTTCACTCTCAATGCTCAAGCAACTGGGTTAGGTGCTGCCCAAGTGGAAGATCAAGTAGAAGTTGAAGTTGCTGATGGTCTTACAATGACCCAGTTTTGTGATAAGATGATTGATTTGTTTTTGAAGGAGAAACCTAGGTCTAGGGATTGGAGGAAGTACTTGGTATTTAGGGATGAGTGGATGAAATATAGGGATCATTTTTACAATAGATGTCGAATTAGGGCTGAATTGGAGATTGATTCTGTTTCCAAGGAGAAGTTGAGTGCCTTAGGTAGAAAAGTTAAGAAGGTAAAATTTTTGATAATTTCCTATTTGTTTTTCTGGGAATACTACATTAAGAAAACCATGGAGTACCAGTTATGTATAGCCTTGTTTGGTAACGAGAGGGTATTTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84540.p1 GENE.S_Transcript_84540~~S_Transcript_84540.p1 ORF type:complete len:195 (+),score=35.84 S_Transcript_84540:91-675(+)
MSTNIFTVQLSTSSSLTNDLLLPYNLSSPLPQLPSCSPFSNFQPLKPTRTPHNLKPTWTLSNFTLNAQATGLGAAQVEDQVEVEVADGLTMTQFCDKMIDLFLKEKPRSRDWRKYLVFRDEWMKYRDHFYNRCRIRAELEIDSVSKEKLSALGRKVKKVKFLIISYLFFWEYYIKKTMEYQLCIALFGNERVFG*

Click here to download the sequence:
Link to NCBI Protein BLAST