Transcript Information: S_Transcript_84562.p1


Annotated TAIR IDAT1G06790.1
Annotated Gene NameRNA polymerase Rpb7 N-terminal domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2087645-2089287 | Forward length=204
E-Value3.1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6393847842982
Replicate 22.4514210619461
Replicate 34.2560160192924
Condition 2: 8 Hour
Replicate 14.7389756260296
Replicate 24.7803095384031
Replicate 37.2874692666603
Condition 3: 24 Hour
Replicate 12.6139176826352
Replicate 23.486740242515
Replicate 32.3713033201391


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_84562.p1 GENE.S_Transcript_84562~~S_Transcript_84562.p1 ORF type:complete len:117 (+),score=1.54,SHS2_Rpb7-N|PF03876.13|1.2e-15 S_Transcript_84562:190-540(+)
ATGTTCTTCCTAAGCGAATTAGAGCACAAATTGAGATTACCTCCACACTTGCTTGATCGTCCTCTTGAAAGTGCCGTTAGACACCAGCTCGAATCTATCTTCTTGGACAAGGTCATTGCGAAATTGGGTCTCTGTGTATCGGTTTACGATATCCAGAAAATTAGCGAGGGTTTGATCTTACACAATGAAGGCGCTCCCACTCACACGGTGCTATTTCGGATGGTCATGTTCCGGCCATATGTCGGAGAAATCATTGCTGCAAAACTTAAAGAGTCAAACTTAACTGGTTTACGCTGTATGTCTAGATCATTTGGCTGTTTTATATTTTTCTCAAAGCGGATGGTAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_84562.p1 GENE.S_Transcript_84562~~S_Transcript_84562.p1 ORF type:complete len:117 (+),score=1.54,SHS2_Rpb7-N|PF03876.13|1.2e-15 S_Transcript_84562:190-540(+)
MFFLSELEHKLRLPPHLLDRPLESAVRHQLESIFLDKVIAKLGLCVSVYDIQKISEGLILHNEGAPTHTVLFRMVMFRPYVGEIIAAKLKESNLTGLRCMSRSFGCFIFFSKRMVV*

Click here to download the sequence:
Link to NCBI Protein BLAST